BLASTX nr result

ID: Coptis23_contig00034411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034411
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1...   165   3e-39
ref|XP_003525743.1| PREDICTED: uncharacterized protein LOC100807...   163   2e-38
ref|XP_003520409.1| PREDICTED: uncharacterized protein LOC100775...   162   2e-38
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   162   3e-38
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   160   8e-38

>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
            vulgaris subsp. vulgaris]
          Length = 2037

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/160 (50%), Positives = 105/160 (65%)
 Frame = +2

Query: 5    ILLFLHPDDKPKNGMDIDKLISAELPDKEADPLLYETIVRTMIHGPCGNKKRGSSCMNDK 184
            ILLF+HPD+K     DIDK+ISAE+PDK   P LY+ +   M+HGPCG     S CM D 
Sbjct: 1199 ILLFMHPDNKFPTAEDIDKIISAEIPDKSKYPKLYDILADCMMHGPCGTANDKSPCMRDG 1258

Query: 185  KKCSRHYPKGFCSETTFDEKGFAVYRRRNNKRTAMVGDKNPVEIDNGWVVPYNPALSKEF 364
              CS+H+PK F   TT D +G+ +YRRR++ RT +   KN V +DN +VVPYN  L  ++
Sbjct: 1259 S-CSKHFPKRFADRTTTDGEGYPIYRRRDDGRTVL---KNGVHLDNRFVVPYNAKLLLKY 1314

Query: 365  QCHINVEYCNRTRMVKYLFKYIAKGQDRATGIIEENLKYD 484
            Q HINVE+CN+ R +KYLFKYI KG DR    +  + + D
Sbjct: 1315 QAHINVEWCNQHRSIKYLFKYINKGHDRVIATLSHDTRGD 1354


>ref|XP_003525743.1| PREDICTED: uncharacterized protein LOC100807389 [Glycine max]
          Length = 1732

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/153 (52%), Positives = 103/153 (67%)
 Frame = +2

Query: 5    ILLFLHPDDKPKNGMDIDKLISAELPDKEADPLLYETIVRTMIHGPCGNKKRGSSCMNDK 184
            +LLFLHPD+K  +  DIDK+ISAE+P  + DP LY  +   MIHGPCG  +  S CM + 
Sbjct: 819  LLLFLHPDNKYPSSTDIDKIISAEIPSHQEDPELYRLVENHMIHGPCGILQSNSPCMKEG 878

Query: 185  KKCSRHYPKGFCSETTFDEKGFAVYRRRNNKRTAMVGDKNPVEIDNGWVVPYNPALSKEF 364
            K CSR YPK F  +T  D  G+ VYRRRNN  +     KN V I N +VVPYNP L K++
Sbjct: 879  K-CSRLYPKQFQPQTLLDSNGYPVYRRRNNGHSI---SKNGVIIGNRYVVPYNPKLLKKY 934

Query: 365  QCHINVEYCNRTRMVKYLFKYIAKGQDRATGII 463
            + HIN+E+CN++  +KYLFKYI KG DR T ++
Sbjct: 935  RAHINIEWCNQSTSIKYLFKYINKGYDRVTTVM 967


>ref|XP_003520409.1| PREDICTED: uncharacterized protein LOC100775782 [Glycine max]
          Length = 1412

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/153 (50%), Positives = 104/153 (67%)
 Frame = +2

Query: 5    ILLFLHPDDKPKNGMDIDKLISAELPDKEADPLLYETIVRTMIHGPCGNKKRGSSCMNDK 184
            +LLFLHPD+K  +  +ID+++ AE+P ++ DP LY  +   M+HGPCG+   GS CM  K
Sbjct: 795  LLLFLHPDNKYPSSDEIDQIVLAEIPSQQDDPELYSLVKNHMVHGPCGSLNPGSPCMK-K 853

Query: 185  KKCSRHYPKGFCSETTFDEKGFAVYRRRNNKRTAMVGDKNPVEIDNGWVVPYNPALSKEF 364
             KCSR YPK F   T  D  GF VYRRRNN       +KN V +DN ++VPYNP L +++
Sbjct: 854  GKCSRFYPKMFQLHTILDADGFPVYRRRNNGNAI---EKNGVIVDNMYIVPYNPRLLRKY 910

Query: 365  QCHINVEYCNRTRMVKYLFKYIAKGQDRATGII 463
            Q HIN+E+CN++  +KYLFKYI KG DR T ++
Sbjct: 911  QAHINIEWCNQSTSIKYLFKYINKGYDRVTVVL 943


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/157 (50%), Positives = 105/157 (66%)
 Frame = +2

Query: 5   ILLFLHPDDKPKNGMDIDKLISAELPDKEADPLLYETIVRTMIHGPCGNKKRGSSCMNDK 184
           ILL+LHP +K     DIDK+I+AE+P KE DP  +  + + M+HGPCG+    + CM D 
Sbjct: 474 ILLWLHPSNKYPTPEDIDKIITAEMPSKEDDPECFNAVKQFMLHGPCGDANINAPCMIDG 533

Query: 185 KKCSRHYPKGFCSETTFDEKGFAVYRRRNNKRTAMVGDKNPVEIDNGWVVPYNPALSKEF 364
             CSR +PK F  ETT D  GF  YRRR++ R    GD N   +DN +VVPYN  L   F
Sbjct: 534 I-CSRKFPKSFFDETTIDRDGFPTYRRRDDGRHVKKGDIN---LDNRYVVPYNRGLLLAF 589

Query: 365 QCHINVEYCNRTRMVKYLFKYIAKGQDRATGIIEENL 475
           Q H+NVE+CN++R +KYLFKY+ KG DRAT +IE+N+
Sbjct: 590 QAHLNVEWCNKSRAIKYLFKYLHKGPDRATMVIEDNV 626


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/157 (50%), Positives = 105/157 (66%)
 Frame = +2

Query: 5   ILLFLHPDDKPKNGMDIDKLISAELPDKEADPLLYETIVRTMIHGPCGNKKRGSSCMNDK 184
           ILL+LHP +K     DIDK+I+AE+P KE DP  +  + + M+HGPCG+    + CM D 
Sbjct: 474 ILLWLHPSNKYPTPEDIDKIITAEMPSKEDDPECFNAVKQFMLHGPCGDANINAPCMIDG 533

Query: 185 KKCSRHYPKGFCSETTFDEKGFAVYRRRNNKRTAMVGDKNPVEIDNGWVVPYNPALSKEF 364
             CSR +PK F  ETT D  GF  YRRR++ R  + GD N   +DN +VVPYN  L   F
Sbjct: 534 I-CSRKFPKSFFDETTIDRDGFPTYRRRDDGRHVIKGDIN---LDNRYVVPYNRGLLLAF 589

Query: 365 QCHINVEYCNRTRMVKYLFKYIAKGQDRATGIIEENL 475
           Q H+NVE+CN++R +KYLFKY+ KG DRA  +IE+N+
Sbjct: 590 QAHLNVEWCNKSRAIKYLFKYLHKGPDRAIMVIEDNV 626


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