BLASTX nr result

ID: Coptis23_contig00034395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034395
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301418.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-59
ref|XP_003591988.1| Neutral invertase-like protein [Medicago tru...   129   1e-58
gb|ADF27782.1| neutral/alkaline invertase 1 [Orobanche ramosa]        127   1e-58
ref|XP_002976468.1| hypothetical protein SELMODRAFT_151264 [Sela...   129   6e-58
ref|XP_002994046.1| hypothetical protein SELMODRAFT_163303 [Sela...   129   6e-58

>ref|XP_002301418.1| predicted protein [Populus trichocarpa] gi|222843144|gb|EEE80691.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  129 bits (325), Expect(2) = 6e-59
 Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 3/106 (2%)
 Frame = +1

Query: 601 ASAQLGVLHTRFWWIILVWAYTKHASDCYFSEQLEIQKGIKLILDICLSNGFDTFPTILC 780
           A  ++  + + FWWIIL+ +Y K   D    ++ E+Q G+KLIL +CLS+GFDTFPT+LC
Sbjct: 114 AIGRVAPVDSGFWWIILLRSYIKRTRDYALLDRPEVQNGMKLILKLCLSDGFDTFPTLLC 173

Query: 781 TDGCSLIDRRIGIDGYPIEIQALFFFALRCAKTMLN---DNKELID 909
            DGCS+IDRR+GI GYPIEIQALF+FALRCAK ML    D KE I+
Sbjct: 174 ADGCSMIDRRMGIYGYPIEIQALFYFALRCAKQMLKPELDGKEFIE 219



 Score =  125 bits (313), Expect(2) = 6e-59
 Identities = 68/123 (55%), Positives = 89/123 (72%)
 Frame = +3

Query: 258 ILEEVWDYLDKSVLYLNSRPIGTLAAADCTLDQLNYDQVFVRDFVPSGLAYLLKPYGDKA 437
           +++E W+ L+KS +Y   +P+GTLAA D + D LNY+QVFVRDFVP+GLA L+K   +  
Sbjct: 1   MVDEAWERLNKSYVYFKGKPVGTLAAMDTSADALNYNQVFVRDFVPTGLACLMK---EPP 57

Query: 438 GIEMVQNFLLIIQKLQEEWEKRVDNYRLGKGVMPASFKVQCNEDDKKETLVADFGECAIG 617
             E+V+NFLL    LQ   EKRVDN+ LG+GV+PASFKV  + D +KETL+ DFG  AIG
Sbjct: 58  EPEIVRNFLLKTLHLQ-GLEKRVDNFTLGEGVLPASFKVLYDSDLEKETLLVDFGASAIG 116

Query: 618 CVA 626
            VA
Sbjct: 117 RVA 119


>ref|XP_003591988.1| Neutral invertase-like protein [Medicago truncatula]
           gi|355481036|gb|AES62239.1| Neutral invertase-like
           protein [Medicago truncatula]
          Length = 553

 Score =  129 bits (323), Expect(2) = 1e-58
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 4/107 (3%)
 Frame = +1

Query: 601 ASAQLGVLHTRFWWIILVWAYTKHASDCYFSEQLEIQKGIKLILDICLSNGFDTFPTILC 780
           A  ++  + + FWWIIL+ AYTK   D   SE  + QKG+KLIL +CLS GFDTFPT+LC
Sbjct: 198 AIGRVAPVDSGFWWIILLRAYTKSTGDLTLSESDDCQKGMKLILTLCLSEGFDTFPTLLC 257

Query: 781 TDGCSLIDRRIGIDGYPIEIQALFFFALRCAKTMLN----DNKELID 909
            DGC +IDRR+G+ GYPIEIQALFF ALRCA +ML     D+KE ++
Sbjct: 258 ADGCCMIDRRMGVYGYPIEIQALFFMALRCALSMLKQDTADDKEYVE 304



 Score =  125 bits (313), Expect(2) = 1e-58
 Identities = 70/124 (56%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
 Frame = +3

Query: 258 ILEEVWDYLDKSVLYLNSRPIGTLAAADCTLDQ-LNYDQVFVRDFVPSGLAYLLKPYGDK 434
           +L + W+ L KS++Y N +P+GTLAA D   ++ LNYDQVFVRDFVPS LA+L+   G+ 
Sbjct: 86  MLADAWESLRKSLVYFNGKPVGTLAAVDHQSEEVLNYDQVFVRDFVPSALAFLMN--GEP 143

Query: 435 AGIEMVQNFLLIIQKLQEEWEKRVDNYRLGKGVMPASFKVQCNEDDKKETLVADFGECAI 614
              E+V+NFLL   +LQ  WEKRVD ++LG+GVMPASFKV  +   K +TL+ADFGE AI
Sbjct: 144 ---EIVKNFLLKTLRLQG-WEKRVDQFKLGEGVMPASFKVLHDAVRKTDTLIADFGESAI 199

Query: 615 GCVA 626
           G VA
Sbjct: 200 GRVA 203


>gb|ADF27782.1| neutral/alkaline invertase 1 [Orobanche ramosa]
          Length = 569

 Score =  127 bits (319), Expect(2) = 1e-58
 Identities = 68/123 (55%), Positives = 89/123 (72%)
 Frame = +3

Query: 258 ILEEVWDYLDKSVLYLNSRPIGTLAAADCTLDQLNYDQVFVRDFVPSGLAYLLKPYGDKA 437
           ++ E W  L +SV++   +P+GT+AA D + ++LNYDQVFVRDFVPS LA+L+   G+  
Sbjct: 104 VVAEAWVALQRSVVHFRGQPVGTIAALDHSTEELNYDQVFVRDFVPSALAFLMN--GEP- 160

Query: 438 GIEMVQNFLLIIQKLQEEWEKRVDNYRLGKGVMPASFKVQCNEDDKKETLVADFGECAIG 617
             E+V+NFLL   +LQ  WEK+VDN+ LG GVMPASFKV  +     ETL+ADFGECAIG
Sbjct: 161 --EIVKNFLLKTLRLQ-SWEKKVDNFTLGAGVMPASFKVLHDPVRNYETLIADFGECAIG 217

Query: 618 CVA 626
            VA
Sbjct: 218 RVA 220



 Score =  126 bits (316), Expect(2) = 1e-58
 Identities = 58/100 (58%), Positives = 75/100 (75%)
 Frame = +1

Query: 601 ASAQLGVLHTRFWWIILVWAYTKHASDCYFSEQLEIQKGIKLILDICLSNGFDTFPTILC 780
           A  ++  + + FWWIIL+ AYTK   D   +E  E Q+GI+LI+ +CLS GFDTFPT+LC
Sbjct: 215 AIGRVAPVDSGFWWIILLRAYTKSTGDNCLAELPECQRGIRLIMTLCLSEGFDTFPTLLC 274

Query: 781 TDGCSLIDRRIGIDGYPIEIQALFFFALRCAKTMLNDNKE 900
            DGCS+IDRR+G+ GYPIEIQALFF ALRCA  +L  ++E
Sbjct: 275 ADGCSMIDRRMGVYGYPIEIQALFFMALRCALLLLKQDEE 314


>ref|XP_002976468.1| hypothetical protein SELMODRAFT_151264 [Selaginella moellendorffii]
           gi|300156098|gb|EFJ22728.1| hypothetical protein
           SELMODRAFT_151264 [Selaginella moellendorffii]
          Length = 467

 Score =  129 bits (324), Expect(2) = 6e-58
 Identities = 61/107 (57%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = +1

Query: 601 ASAQLGVLHTRFWWIILVWAYTKHASDCYFSEQLEIQKGIKLILDICLSNGFDTFPTILC 780
           A  ++  + + FWWIIL+ AYT+   D   ++  + Q+GIKLIL +CL+ GFDTFPT+LC
Sbjct: 112 AIGRVAPVDSGFWWIILLRAYTRSTGDHSLADMPDCQRGIKLILTLCLAEGFDTFPTLLC 171

Query: 781 TDGCSLIDRRIGIDGYPIEIQALFFFALRCAKTMLND----NKELID 909
            DGC ++DRR+GI GYPIEIQALFF ALRCAKTML      NKEL++
Sbjct: 172 ADGCCMVDRRMGIYGYPIEIQALFFMALRCAKTMLKQEAPGNKELLE 218



 Score =  122 bits (305), Expect(2) = 6e-58
 Identities = 63/123 (51%), Positives = 86/123 (69%)
 Frame = +3

Query: 258 ILEEVWDYLDKSVLYLNSRPIGTLAAADCTLDQLNYDQVFVRDFVPSGLAYLLKPYGDKA 437
           ++ E W++L +S++Y    P+GT+AA D   + LNY+QVFVRDFVPS LA+L+    D  
Sbjct: 1   MIGEAWEHLRRSIVYFRGNPVGTIAANDSAEEVLNYNQVFVRDFVPSALAFLMNGESD-- 58

Query: 438 GIEMVQNFLLIIQKLQEEWEKRVDNYRLGKGVMPASFKVQCNEDDKKETLVADFGECAIG 617
              +V+NFLL   +LQ  WEKR+DN+ LG+G MPASFKV  +   + +T+VADFGE AIG
Sbjct: 59  ---IVKNFLLKALRLQ-AWEKRIDNFTLGQGAMPASFKVLHDPVRRTDTMVADFGESAIG 114

Query: 618 CVA 626
            VA
Sbjct: 115 RVA 117


>ref|XP_002994046.1| hypothetical protein SELMODRAFT_163303 [Selaginella moellendorffii]
           gi|300138100|gb|EFJ04880.1| hypothetical protein
           SELMODRAFT_163303 [Selaginella moellendorffii]
          Length = 467

 Score =  129 bits (324), Expect(2) = 6e-58
 Identities = 61/107 (57%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = +1

Query: 601 ASAQLGVLHTRFWWIILVWAYTKHASDCYFSEQLEIQKGIKLILDICLSNGFDTFPTILC 780
           A  ++  + + FWWIIL+ AYT+   D   ++  + Q+GIKLIL +CL+ GFDTFPT+LC
Sbjct: 112 AIGRVAPVDSGFWWIILLRAYTRSTGDHSLADMPDCQRGIKLILTLCLAEGFDTFPTLLC 171

Query: 781 TDGCSLIDRRIGIDGYPIEIQALFFFALRCAKTMLND----NKELID 909
            DGC ++DRR+GI GYPIEIQALFF ALRCAKTML      NKEL++
Sbjct: 172 ADGCCMVDRRMGIYGYPIEIQALFFMALRCAKTMLKQEAPGNKELLE 218



 Score =  122 bits (305), Expect(2) = 6e-58
 Identities = 63/123 (51%), Positives = 86/123 (69%)
 Frame = +3

Query: 258 ILEEVWDYLDKSVLYLNSRPIGTLAAADCTLDQLNYDQVFVRDFVPSGLAYLLKPYGDKA 437
           ++ E W++L +S++Y    P+GT+AA D   + LNY+QVFVRDFVPS LA+L+    D  
Sbjct: 1   MIGEAWEHLRRSIVYFRGNPVGTIAANDSVEEVLNYNQVFVRDFVPSALAFLMNGESD-- 58

Query: 438 GIEMVQNFLLIIQKLQEEWEKRVDNYRLGKGVMPASFKVQCNEDDKKETLVADFGECAIG 617
              +V+NFLL   +LQ  WEKR+DN+ LG+G MPASFKV  +   + +T+VADFGE AIG
Sbjct: 59  ---IVKNFLLKALRLQ-AWEKRIDNFTLGQGAMPASFKVLHDPVRRTDTMVADFGESAIG 114

Query: 618 CVA 626
            VA
Sbjct: 115 RVA 117


Top