BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034389
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...    55   5e-06
ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...    55   5e-06

>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
           gi|223541761|gb|EEF43309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
 Frame = +3

Query: 150 SKRVPSLKIVFELKMNK------KNVPKKIILSEGAPKLPED--VGNNDDVQPKLISSDG 305
           ++R  SL +  +LK +K      KNV +KI+LS  AP + E+   GNN ++ P   +  G
Sbjct: 38  NRRALSLSVSCKLKTSKEVENKDKNVSRKILLSNSAPPVSEEGGAGNNGEI-PDKAAKGG 96

Query: 306 GGVLRFVKRVPRRALSIL 359
           GG LRF KR+PR+ LS+L
Sbjct: 97  GGPLRFFKRLPRKVLSVL 114


>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 45/116 (38%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
 Frame = +3

Query: 63  MHSLNPSRTLNHVTPQPLL---FKPHRHNNYTSKRVP------SLKIVFELKMNK----- 200
           M++L PS +       PLL   FKP      T    P      S  I  +LK ++     
Sbjct: 1   MYTLKPSFSKTLFLKSPLLRSSFKPQFFPYTTQISSPCSSTPLSFSITCKLKTSEDGKSS 60

Query: 201 KNVPKKIILSEGAPKLPEDVGNNDDVQPKLISSDGGGVLRF---VKRVPRRALSIL 359
           K++ KKI+LSEGAP + ED   N + QPK  S  GGG   F   VKR PR+ LS L
Sbjct: 61  KSLAKKIVLSEGAPAVSEDGAGNGEAQPKPASKGGGGGGGFGGLVKRFPRKVLSRL 116