BLASTX nr result

ID: Coptis23_contig00034387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034387
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319951.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_002276175.1| PREDICTED: fasciclin-like arabinogalactan pr...   137   1e-30
ref|XP_002326085.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_004144575.1| PREDICTED: fasciclin-like arabinogalactan pr...   123   1e-26
ref|XP_003541930.1| PREDICTED: fasciclin-like arabinogalactan pr...   108   3e-22

>ref|XP_002319951.1| predicted protein [Populus trichocarpa] gi|222858327|gb|EEE95874.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/127 (58%), Positives = 95/127 (74%)
 Frame = -1

Query: 430 LSSNGYVSFAIGLRSVLDRILIDYTDLSSVTIFAPSGFAYIASPSPMLERLVRLHILPER 251
           LSS+ +VSFAIGL SVLDRIL D+ +LSSVTIFAP    ++AS SPMLE++VRLHILP+R
Sbjct: 221 LSSHRFVSFAIGLNSVLDRILADHKNLSSVTIFAPPELEFVASSSPMLEKIVRLHILPQR 280

Query: 250 YEYRELVSMLAKASLRTLFNGDDLEVTEDYNAKGVLGINGVEITAPDILSSKEFVIHGIS 71
             Y EL ++  K  LRTL   +DL++T+       L INGVEI AP+I SSKEF++HGI+
Sbjct: 281 ATYIELAALPDKQRLRTLLPDEDLKITKGVGVTQGLAINGVEIAAPEIFSSKEFIVHGIT 340

Query: 70  RPFKMVK 50
           + FK+ K
Sbjct: 341 QAFKIAK 347


>ref|XP_002276175.1| PREDICTED: fasciclin-like arabinogalactan protein 21-like [Vitis
           vinifera]
          Length = 354

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/131 (56%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = -1

Query: 436 RQLSSNGYVSFAIGLRSVLDRILIDYTDLSSVTIFAPSGFAYIASPSPMLERLVRLHILP 257
           R LSSNG+VSFA+GL +VL  +  D+T LS  TIFAP   A  ASPSP+L+R+VR HILP
Sbjct: 220 RMLSSNGFVSFAVGLHTVLGGVAQDFTSLSCATIFAPPDLALSASPSPLLDRIVRFHILP 279

Query: 256 ERYEYRELVSMLAKASLRTLFNGDDLEVT-EDYNAKGVLGINGVEITAPDILSSKEFVIH 80
            R  Y EL S+  KA + TL    DLEVT    N+  VL INGV+I APD+ SSK+F+IH
Sbjct: 280 RRLSYIELASLPQKAKIGTLLPDRDLEVTGRVKNSSQVLVINGVDIVAPDVFSSKKFIIH 339

Query: 79  GISRPFKMVKL 47
            ISR FK+ +L
Sbjct: 340 VISRAFKLAEL 350


>ref|XP_002326085.1| predicted protein [Populus trichocarpa] gi|222862960|gb|EEF00467.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/131 (53%), Positives = 88/131 (67%)
 Frame = -1

Query: 430 LSSNGYVSFAIGLRSVLDRILIDYTDLSSVTIFAPSGFAYIASPSPMLERLVRLHILPER 251
           LSS+  V FAIGL SV++RIL D   LSSVTIFAPS F ++AS SPMLE++VR HILP R
Sbjct: 35  LSSHRIVLFAIGLNSVINRILADDQSLSSVTIFAPSEFEFVASSSPMLEKIVRFHILPLR 94

Query: 250 YEYRELVSMLAKASLRTLFNGDDLEVTEDYNAKGVLGINGVEITAPDILSSKEFVIHGIS 71
             Y EL ++  K  L TL   +DLE+    N    L INGVEI AP+I SS++ ++H I 
Sbjct: 95  VTYIELAALPHKKRLMTLLPCEDLEIINGANVTQGLSINGVEIAAPEIFSSRKLIVHEIP 154

Query: 70  RPFKMVKLSST 38
           + FKM K  +T
Sbjct: 155 QAFKMAKFPNT 165


>ref|XP_004144575.1| PREDICTED: fasciclin-like arabinogalactan protein 21-like [Cucumis
           sativus]
          Length = 358

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/131 (45%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = -1

Query: 436 RQLSSNGYVSFAIGLRSVLDRILIDYTDLSSVTIFAPSGFAYIASPSPMLERLVRLHILP 257
           R LS+NG++S+AIGL++VL+ +L D+  L S+T+FAP   + +ASPSP+L R VRLHI+P
Sbjct: 223 RWLSANGFISYAIGLQTVLEGLLQDFEGLRSITVFAPPNLSSVASPSPVLNRAVRLHIVP 282

Query: 256 ERYEYRELVSMLAKASLRTLFNGDDLEVTEDYNA-KGVLGINGVEITAPDILSSKEFVIH 80
           +   Y+ L S+  + SL+TL +G D+E+       +G + +NGVEI +P+I  S+  VIH
Sbjct: 283 QMVTYKSLASLPTRTSLKTLVSGQDIEILGGVRVPRGTVKVNGVEIVSPEIFRSENCVIH 342

Query: 79  GISRPFKMVKL 47
           GISR  ++  L
Sbjct: 343 GISRSLEIAGL 353


>ref|XP_003541930.1| PREDICTED: fasciclin-like arabinogalactan protein 21-like [Glycine
           max]
          Length = 379

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/131 (44%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = -1

Query: 430 LSSNGYVSFAIGLRSVLDRILIDYT-DLSSVTIFAPSGFAYIASPSPMLERLVRLHILPE 254
           L + GY SF+I L SVLD I  D++  L  VTIFAP     +  P  +L+R VRLHILP+
Sbjct: 249 LRAKGYASFSIALHSVLDGIKRDFSGSLGYVTIFAPRDLTLLGYPLTILDRAVRLHILPQ 308

Query: 253 RYEYRELVSMLAKASLRTLFNGDDLEVTEDYNAKGVLGINGVEITAPDILSSKEFVIHGI 74
           R+ Y+E+ S+  ++ L+TL   + LE+    +    + +NGV I APD++ S++FV+HGI
Sbjct: 309 RFVYKEISSLPVRSLLKTLMPDEHLEIDGVLDFVPGMVVNGVVIVAPDMIISEKFVVHGI 368

Query: 73  SRPFKMVKLSS 41
           SR FKM +++S
Sbjct: 369 SRAFKMAEVTS 379


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