BLASTX nr result

ID: Coptis23_contig00034386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034386
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|2...   293   8e-78
emb|CBI25467.3| unnamed protein product [Vitis vinifera]              288   3e-76
ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, ch...   288   3e-76
ref|XP_002315154.1| predicted protein [Populus trichocarpa] gi|2...   287   7e-76
gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var....   286   9e-76

>ref|XP_002312163.1| predicted protein [Populus trichocarpa] gi|222851983|gb|EEE89530.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  293 bits (751), Expect = 8e-78
 Identities = 129/163 (79%), Positives = 145/163 (88%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   HQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSAPFPLFAYPVYLWHRSPGKQGSHFNP 182
           HQNHGHVENDESWHPL EK+Y+ L + +RKLRF+ PFP+ AYPVYLW+RSPGK+GSHF+P
Sbjct: 210 HQNHGHVENDESWHPLPEKIYRSLDNVTRKLRFTLPFPMLAYPVYLWNRSPGKKGSHFHP 269

Query: 183 NSDLFHSNERKEVIVSTICWIAMAALLVVASCVMGPIQILKLYSVPYWIFVMWLDLVTYL 362
           +SDLF  NERK+VI ST CW AMAALLV  S VMGP Q+LKLY +PYWIFVMWLDLVTYL
Sbjct: 270 DSDLFVPNERKDVITSTACWTAMAALLVSLSFVMGPFQVLKLYGIPYWIFVMWLDLVTYL 329

Query: 363 HHHG-ERKMPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGT 488
           HHHG + K+PWYRGKEWSYLRGGLTT+DRDYGWINNIHHDIGT
Sbjct: 330 HHHGHDEKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGT 372


>emb|CBI25467.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  288 bits (737), Expect = 3e-76
 Identities = 128/163 (78%), Positives = 143/163 (87%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   HQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSAPFPLFAYPVYLWHRSPGKQGSHFNP 182
           HQNHGHVENDESWHPL+EK+Y+ L   +R LRF+ PFP+ AYP+YLW RSPGK GSHF+P
Sbjct: 208 HQNHGHVENDESWHPLSEKIYRSLDTATRTLRFTLPFPMLAYPLYLWGRSPGKTGSHFDP 267

Query: 183 NSDLFHSNERKEVIVSTICWIAMAALLVVASCVMGPIQILKLYSVPYWIFVMWLDLVTYL 362
           NSDLF  NERK+VI ST+CW AMAALLV  S VMGP+Q+LKLY +PYWIFVMWLDLVTYL
Sbjct: 268 NSDLFIPNERKDVITSTVCWSAMAALLVCLSFVMGPVQMLKLYGIPYWIFVMWLDLVTYL 327

Query: 363 HHHG-ERKMPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGT 488
           HHHG E K+PWYRGKEWSYLRGGLTT+DRDYG INNIHHDIGT
Sbjct: 328 HHHGHEEKLPWYRGKEWSYLRGGLTTLDRDYGVINNIHHDIGT 370


>ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
           vinifera]
          Length = 456

 Score =  288 bits (737), Expect = 3e-76
 Identities = 128/163 (78%), Positives = 143/163 (87%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   HQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSAPFPLFAYPVYLWHRSPGKQGSHFNP 182
           HQNHGHVENDESWHPL+EK+Y+ L   +R LRF+ PFP+ AYP+YLW RSPGK GSHF+P
Sbjct: 215 HQNHGHVENDESWHPLSEKIYRSLDTATRTLRFTLPFPMLAYPLYLWGRSPGKTGSHFDP 274

Query: 183 NSDLFHSNERKEVIVSTICWIAMAALLVVASCVMGPIQILKLYSVPYWIFVMWLDLVTYL 362
           NSDLF  NERK+VI ST+CW AMAALLV  S VMGP+Q+LKLY +PYWIFVMWLDLVTYL
Sbjct: 275 NSDLFIPNERKDVITSTVCWSAMAALLVCLSFVMGPVQMLKLYGIPYWIFVMWLDLVTYL 334

Query: 363 HHHG-ERKMPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGT 488
           HHHG E K+PWYRGKEWSYLRGGLTT+DRDYG INNIHHDIGT
Sbjct: 335 HHHGHEEKLPWYRGKEWSYLRGGLTTLDRDYGVINNIHHDIGT 377


>ref|XP_002315154.1| predicted protein [Populus trichocarpa] gi|222864194|gb|EEF01325.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  287 bits (734), Expect = 7e-76
 Identities = 126/163 (77%), Positives = 142/163 (87%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   HQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSAPFPLFAYPVYLWHRSPGKQGSHFNP 182
           HQNHGHVENDESW PL EK+YK L + +R LRF+ PFP+ AYPVYLW RSPGK+GSHF+P
Sbjct: 210 HQNHGHVENDESWQPLPEKIYKSLDNVTRTLRFTLPFPMLAYPVYLWSRSPGKKGSHFHP 269

Query: 183 NSDLFHSNERKEVIVSTICWIAMAALLVVASCVMGPIQILKLYSVPYWIFVMWLDLVTYL 362
           +SDLF  NERK+VI ST CW AMAAL+   S VMGP+Q+LKLY +PYWIFVMWLDLVTYL
Sbjct: 270 DSDLFAPNERKDVITSTACWTAMAALVACLSFVMGPVQMLKLYGIPYWIFVMWLDLVTYL 329

Query: 363 HHHG-ERKMPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGT 488
           HHHG + K+PWYRGKEWSYLRGGLTT+DRDYGWINNIHHDIGT
Sbjct: 330 HHHGHDEKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGT 372


>gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var. sarcodactylis]
          Length = 457

 Score =  286 bits (733), Expect = 9e-76
 Identities = 128/163 (78%), Positives = 141/163 (86%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   HQNHGHVENDESWHPLTEKVYKQLPDQSRKLRFSAPFPLFAYPVYLWHRSPGKQGSHFNP 182
           HQNHGHVENDESWHPL+EK+++ L   +R LRF  PFPL AYP YLW RSPGK GSHF+P
Sbjct: 216 HQNHGHVENDESWHPLSEKIFRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDP 275

Query: 183 NSDLFHSNERKEVIVSTICWIAMAALLVVASCVMGPIQILKLYSVPYWIFVMWLDLVTYL 362
           NSDLF  +ERK+VI ST+CW AMAALLV  S VMGP+Q+LKLY VPYWIFVMWLDLVTYL
Sbjct: 276 NSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYL 335

Query: 363 HHHG-ERKMPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGT 488
           HHHG E K+PWYRGKEWSYLRGGLTT+DRDYGW NNIHHDIGT
Sbjct: 336 HHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGT 378


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