BLASTX nr result

ID: Coptis23_contig00034380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034380
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, ...   129   3e-28
ref|XP_002300634.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
emb|CBI40742.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   125   3e-27
gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]              114   6e-24

>ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223551405|gb|EEF52891.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 458

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/90 (68%), Positives = 76/90 (84%)
 Frame = -2

Query: 272 VAVENNNVANISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQA 93
           VAVEN +VANIS D++ A+EWF  R+ PF+P+TS+VAIAVGNE+LT+D   L P+ LVQA
Sbjct: 74  VAVENYHVANISSDVSAADEWFANRVVPFIPATSVVAIAVGNEYLTTDPDHLRPNNLVQA 133

Query: 92  IGNIHSVLTAHGLDRKIKVTTPHSMAILAS 3
           + N+H+VL A GLDRKIKVTTPHSMAILAS
Sbjct: 134 MQNLHAVLVARGLDRKIKVTTPHSMAILAS 163


>ref|XP_002300634.1| predicted protein [Populus trichocarpa] gi|222842360|gb|EEE79907.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = -2

Query: 272 VAVENNNVANISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQA 93
           VAVEN +VANIS D + A+EW T R+ PF+P+TSIVAIAVGNE+LT+D   L P+AL+QA
Sbjct: 71  VAVENYHVANISTDTSAADEWLTNRVVPFIPATSIVAIAVGNEYLTTDPDHLKPNALIQA 130

Query: 92  IGNIHSVLTAHGLDRKIKVTTPHSMAILAS 3
           + N+H+VL   GLDRKIKVTTPHSMA+LAS
Sbjct: 131 MQNLHAVLVQRGLDRKIKVTTPHSMAVLAS 160


>emb|CBI40742.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = -2

Query: 272 VAVENNNVANISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQA 93
           VAVEN +V+NIS D+  A+EWF  R++PF+P+TSIVAIAVGNE+LT+D   L  +ALVQA
Sbjct: 100 VAVENYHVSNISSDVAAADEWFATRVAPFIPATSIVAIAVGNEYLTTDTDHLALNALVQA 159

Query: 92  IGNIHSVLTAHGLDRKIKVTTPHSMAILAS 3
           + N+H VL A GLDRKIKVTTPHSMA+LAS
Sbjct: 160 MQNLHGVLLARGLDRKIKVTTPHSMAVLAS 189


>ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Vitis vinifera]
           gi|147832741|emb|CAN72608.1| hypothetical protein
           VITISV_021340 [Vitis vinifera]
          Length = 460

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = -2

Query: 272 VAVENNNVANISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQA 93
           VAVEN +V+NIS D+  A+EWF  R++PF+P+TSIVAIAVGNE+LT+D   L  +ALVQA
Sbjct: 75  VAVENYHVSNISSDVAAADEWFATRVAPFIPATSIVAIAVGNEYLTTDTDHLALNALVQA 134

Query: 92  IGNIHSVLTAHGLDRKIKVTTPHSMAILAS 3
           + N+H VL A GLDRKIKVTTPHSMA+LAS
Sbjct: 135 MQNLHGVLLARGLDRKIKVTTPHSMAVLAS 164


>gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]
          Length = 456

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/90 (64%), Positives = 74/90 (82%)
 Frame = -2

Query: 272 VAVENNNVANISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQA 93
           VAVEN+++ N+S   + A++WF  RI PF+PSTSIV IAVGNE+LT DD  LD +AL+QA
Sbjct: 76  VAVENSHIRNLSATQSNADKWFVTRILPFIPSTSIVTIAVGNEYLT-DDQLLDHNALLQA 134

Query: 92  IGNIHSVLTAHGLDRKIKVTTPHSMAILAS 3
           + N+HSVL + GLDRKIKV+TPHSMA+LAS
Sbjct: 135 MENLHSVLLSRGLDRKIKVSTPHSMAVLAS 164


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