BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034366
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   224   2e-56
emb|CAN60595.1| hypothetical protein VITISV_015221 [Vitis vinifera]   198   2e-48
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   197   3e-48
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]   196   6e-48
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]   196   1e-47

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 642

 Score =  224 bits (571), Expect = 2e-56
 Identities = 108/306 (35%), Positives = 165/306 (53%)
 Frame = -2

Query: 995  DTLDWNFLWAVMHKMGFDGKLIGWI*GAVANNSISILFNGGPIGCFTAERGLRQGDPLSP 816
            DTL+W+FL  V+   GF+     WI   + ++ + I  NG   G F   RG+RQGDPLSP
Sbjct: 329  DTLNWDFLLLVLKTFGFNELFCNWIKTILHSSKMFISMNGAQHGFFNCNRGVRQGDPLSP 388

Query: 815  ILFAFAEDCLSKGLEWLCVNKRLQRVVSQSNYSSPTHLMFADDIFIFCNASRRHLINLME 636
            +LF   E+ LS+ +  L     +  + +  N   P H  + DD+ +FC A    LI L  
Sbjct: 389  LLFCIVEEVLSRSISILADKGLIDLIAASRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKS 448

Query: 635  LLDSYQLAAGQLISKEKCKIFLSPMSHRRKQVIEEIMVIKKNFFSENYLGVPLTVGRVTR 456
            L   Y   +GQ+++  K  IF   ++  R   I  I+          YLG P+  G+   
Sbjct: 449  LFTRYADCSGQIMNIRKSFIFAGGITDTRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKG 508

Query: 455  ATLAPLVDKIRKRAASWAGKMLSFKGRVALAKQVLNNIPVHNMTIYKWPTSVIKECEGII 276
                P+ DK++ + A W   +LS  GR+ L K V+ ++ VH M+IY WP  ++KE E  I
Sbjct: 509  IHFQPIADKVKAKLAKWKASLLSIAGRIQLVKSVVQSMLVHTMSIYSWPIKILKEMEKWI 568

Query: 275  RNFIWSGNLAERKFITVKWQKVCLPEEEGGLGLRKLKDINLAMLMKLAWNLLNGNSDWSE 96
            +NFIWSG++ +RK +TV W+K+C   EEGGLG++ L  +N A  +K+ WNL+  +  W+ 
Sbjct: 569  KNFIWSGDVTKRKMVTVAWRKICADYEEGGLGVKSLICLNEATNLKICWNLMQSDEQWAN 628

Query: 95   FMNGKY 78
             +   +
Sbjct: 629  IIRNSW 634


>emb|CAN60595.1| hypothetical protein VITISV_015221 [Vitis vinifera]
          Length = 849

 Score =  198 bits (503), Expect = 2e-48
 Identities = 118/335 (35%), Positives = 177/335 (52%), Gaps = 9/335 (2%)
 Frame = -2

Query: 995  DTLDWNFLWAVMHKMGFDGKLIGWI*GAVANNSISILFNGGPIGCFTAERGLRQGDPLSP 816
            D +DW F+  VM KMGF  K I WI   ++  S S+L NG P G F + +GLRQGDPLSP
Sbjct: 220  DNVDWTFILTVMQKMGFGEKWIRWIKWCISTASFSVLVNGTPTGFFQSSKGLRQGDPLSP 279

Query: 815  ILFAFAEDCLSKGLEWLCVNKRLQ--RVVSQSNYSSP-THLMFADDIFIFCNASRRHLIN 645
             LF  A +  S  L+       L   RV  +S   +  +HL+FADD  +FC  S+ HL +
Sbjct: 280  YLFVIAMEDFSAFLQRAVEGGYLSGCRVKGRSEEGALISHLLFADDTLVFCKPSQDHLTH 339

Query: 644  LMELLDSYQLAAGQLISKEKCKIFLSPMSHRRKQVIEEIMVIKKNFFSENYLGVPLTVGR 465
            L  LL  ++ A+G  I+ +K ++           +  E    K       YLG+PL    
Sbjct: 340  LSWLLIWFEAASGLRINLDKSELIPVGRVENMDDLAWEFGC-KVGSLPSTYLGMPLGASF 398

Query: 464  VTRATLAPLVDKIRKRAASWAGKMLSFKGRVALAKQVLNNIPVHNMTIYKWPTSVIKECE 285
             + +    + D+ RKR   W  + LS  GR  L +  L+N+P++ M++   P+ V +  E
Sbjct: 399  KSTSVWDGVEDRFRKRLGMWKRQYLSKGGRATLIRSTLSNLPIYLMSLLCLPSVVRRRLE 458

Query: 284  GIIRNFIWSGNLAERKFITVKWQKVCLPEEEGGLGLRKLKDINLAMLMKLAWNLLNGNSD 105
             I R+F+W G   ERK   V+W+ VCL +++GGLG++ L  +N A+L K  W   N    
Sbjct: 459  KIQRDFLWGGGNLERKPHLVRWEVVCLSKKKGGLGVKNLSILNKALLAKWNWRFANEREA 518

Query: 104  -WSEFMNGKYRNKAGGWASQK-----SSTVWTGIQ 18
             W++ + GKY  + GGW+S++        +W GI+
Sbjct: 519  LWNQVIRGKYGEERGGWSSREVREAHGLGLWKGIR 553


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  197 bits (501), Expect = 3e-48
 Identities = 107/308 (34%), Positives = 170/308 (55%), Gaps = 2/308 (0%)
 Frame = -2

Query: 995  DTLDWNFLWAVMHKMGFDGKLIGWI*GAVANNSISILFNGGPIGCFTAERGLRQGDPLSP 816
            D ++W FL  ++  MGFDG+ +  +   VA  S S + NG   G  T  RGLRQGDPLSP
Sbjct: 589  DRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSP 648

Query: 815  ILFAFAEDCLSKGLEWLCVNKRLQRVVSQSNYSSPTHLMFADDIFIFCNASRRHLINLME 636
             LF    D  S+ ++   V+K +    +  N    +HL+FADD  +F  A+R+  + +++
Sbjct: 649  FLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVD 708

Query: 635  LLDSYQLAAGQLISKEKCKI-FLSPMSHRRKQVIEEIMVIKKNFFSENYLGVPLTVGRVT 459
            +L+ Y+ A+GQ I+ EK ++ F   +S  +K+ +  ++ +++    + YLG+P   GR  
Sbjct: 709  ILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSK 768

Query: 458  RATLAPLVDKIRKRAASWAGKMLSFKGRVALAKQVLNNIPVHNMTIYKWPTSVIKECEGI 279
            +     L+D++ K+   W  K+LS  G+  L K V+  +P + M +YK P +VI+E    
Sbjct: 769  KVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSA 828

Query: 278  IRNFIWSGNLAERKFITVKWQKVCLPEEEGGLGLRKLKDINLAMLMKLAWNLL-NGNSDW 102
            +  F W G   ERK   + W+K+C P+  GG+G + L   N A+L K  W LL N  S  
Sbjct: 829  MARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLL 888

Query: 101  SEFMNGKY 78
            S  M+ KY
Sbjct: 889  SRVMSAKY 896


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score =  196 bits (499), Expect = 6e-48
 Identities = 117/338 (34%), Positives = 179/338 (52%), Gaps = 12/338 (3%)
 Frame = -2

Query: 995  DTLDWNFLWAVMHKMGFDGKLIGWI*GAVANNSISILFNGGPIGCFTAERGLRQGDPLSP 816
            D +DW+FL  VM KMGF  K +GWI   ++  S S+L NG P G F + RGLRQGDPLSP
Sbjct: 1219 DNVDWSFLLTVMQKMGFGEKWLGWIKWCISTASFSVLINGTPKGFFQSSRGLRQGDPLSP 1278

Query: 815  ILFAFAEDCLSKGLEWLCVNKRLQRVVSQSNYSSP---THLMFADDIFIFCNASRRHLIN 645
             LF    +  S  L     N  +     +         +HL+FADD  +FC AS+  L  
Sbjct: 1279 YLFVIXMEVFSSFLNRAVDNGYISGCQVKGRNEGGIQISHLLFADDTLVFCQASQDQLTY 1338

Query: 644  LMELLDSYQLAAGQLISKEKCKIFLSPMSHRRKQVIEEIMV---IKKNFFSENYLGVPLT 474
            L  LL  ++  +G  I+ +K ++   P+   R   I+++ +    K       YLG+PL 
Sbjct: 1339 LSWLLMWFEAXSGMRINLDKSELI--PVG--RVVDIDDLALDFGCKVGSLPSTYLGLPLG 1394

Query: 473  VGRVTRATLAPLVDKIRKRAASWAGKMLSFKGRVALAKQVLNNIPVHNMTIYKWPTSVIK 294
                + A    + ++ RKR   W  + LS  GR  L +  L+N+P++ M++ + P+SV  
Sbjct: 1395 APFKSVAMWDGVEERFRKRLTMWKRQYLSKGGRATLIRSTLSNLPIYYMSVLRLPSSVRS 1454

Query: 293  ECEGIIRNFIWSGNLAERKFITVKWQKVCLPEEEGGLGLRKLKDINLAMLMKLAWNLLNG 114
              E I R+F+W G   ERK   V+W+ VCL +++GGLG++ L ++N A+L K  W   N 
Sbjct: 1455 RLEQIQRDFLWGGGSLERKPHLVRWKVVCLSKKKGGLGIKCLSNLNKALLSKWNWRYANE 1514

Query: 113  NSD-WSEFMNGKYRNKAGGWASQK-----SSTVWTGIQ 18
                W++ + GKY    GGW++++        +W GI+
Sbjct: 1515 REALWNQVIRGKYGEDRGGWSTREVREAHGVGLWKGIR 1552


>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
          Length = 945

 Score =  196 bits (497), Expect = 1e-47
 Identities = 117/335 (34%), Positives = 176/335 (52%), Gaps = 9/335 (2%)
 Frame = -2

Query: 995  DTLDWNFLWAVMHKMGFDGKLIGWI*GAVANNSISILFNGGPIGCFTAERGLRQGDPLSP 816
            D +DW F+  VM KMGF  K I WI   ++  S S+L NG P G F + + LRQGDPLSP
Sbjct: 316  DNVDWTFILTVMQKMGFGEKWIRWIKWCISTASFSVLVNGTPTGFFQSSKRLRQGDPLSP 375

Query: 815  ILFAFAEDCLSKGLEWLCVNKRLQ--RVVSQSNYSSP-THLMFADDIFIFCNASRRHLIN 645
             LF  A +  S  L+       L   RV  +S   +  +HL+FADD  +FC  S+ HL +
Sbjct: 376  YLFVIAMEVFSAFLQRAVEGGYLSGCRVKGRSEEGALISHLLFADDTLVFCKPSQDHLTH 435

Query: 644  LMELLDSYQLAAGQLISKEKCKIFLSPMSHRRKQVIEEIMVIKKNFFSENYLGVPLTVGR 465
            L  LL  ++ A+G  I+ +K ++           +  E    K       YLG+PL    
Sbjct: 436  LSWLLMWFEAASGLRINLDKSELIPVGRVENMDDLAWEFGC-KVGSLPSTYLGMPLGASF 494

Query: 464  VTRATLAPLVDKIRKRAASWAGKMLSFKGRVALAKQVLNNIPVHNMTIYKWPTSVIKECE 285
             + +    + D+ RKR   W  + LS  GR  L +  L+N+P++ M++   P+ V +  E
Sbjct: 495  KSTSVWDGVEDRFRKRLGMWKRQYLSKGGRTTLIRSTLSNLPIYLMSLLCLPSVVRRRLE 554

Query: 284  GIIRNFIWSGNLAERKFITVKWQKVCLPEEEGGLGLRKLKDINLAMLMKLAWNLLNGNSD 105
             I R+F+W G   ERK   V+W+ VCL +++GGLG++ L  +N A+L K  W   N    
Sbjct: 555  KIQRDFLWGGGNLERKPHLVRWEVVCLSKKKGGLGVKNLSILNKALLAKWNWRFANEREA 614

Query: 104  -WSEFMNGKYRNKAGGWASQK-----SSTVWTGIQ 18
             W++ + GKY  + GGW+S++        +W GI+
Sbjct: 615  LWNQVIRGKYGEERGGWSSREVREAHGLGLWKGIR 649