BLASTX nr result

ID: Coptis23_contig00034363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034363
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35378.3| unnamed protein product [Vitis vinifera]               59   4e-07
emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera]    57   2e-06
ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249...    55   4e-06
emb|CAN80237.1| hypothetical protein VITISV_036283 [Vitis vinifera]    55   6e-06
emb|CBI14773.3| unnamed protein product [Vitis vinifera]               55   8e-06

>emb|CBI35378.3| unnamed protein product [Vitis vinifera]
          Length = 1633

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
 Frame = -3

Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLKSKEV 161
           N+ I ++  G  L +F+   + ER++     +  + E+I  +W+PE G +  + +  KE 
Sbjct: 18  NLNIDVLGGGCLLFVFECSSEAERVLSRGKRRVKDNELILEKWHPEVGCLG-NKVMVKEA 76

Query: 160 WLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLNCSSKK-----VRVK 26
           W+   G+PLHL +RE+   +   CG +   DE + + ++ +     VRVK
Sbjct: 77  WVRVVGLPLHLWSREVFKLIGDGCGGLINVDEETFSMANLQWARLLVRVK 126


>emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera]
          Length = 1767

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/99 (27%), Positives = 53/99 (53%)
 Frame = -3

Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLKSKEV 161
           N+ I ++  G  L  F+   + ER++     +  + E+I  +W+PE G +  + +  KE 
Sbjct: 225 NLNIDVLGGGFLLFEFECSSEAERVLTRGKRRVKDNELILEKWHPEVGCLG-NKVMVKEA 283

Query: 160 WLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLNCSS 44
           W+   G+PLHL +RE+   +   CG +   DE +++ ++
Sbjct: 284 WVRVVGLPLHLWSREVFKLIGDGCGGLIKVDEKTVSMAN 322


>ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera]
          Length = 2143

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/99 (27%), Positives = 53/99 (53%)
 Frame = -3

Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLKSKEV 161
           N+ I ++  G  L  F+   + ER++     +  + E+I  +W+PE G +  + +  KE 
Sbjct: 374 NLNIDVLGGGFLLFEFECSSEAERVLTRGKRRVKDNELIQEKWHPEVGCLG-NKVMVKEA 432

Query: 160 WLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLNCSS 44
           W+   G+PLHL +RE+   +   CG +   DE +++ ++
Sbjct: 433 WVRVVGLPLHLWSREVFKLIGDGCGGLIKVDEKTVSMAN 471


>emb|CAN80237.1| hypothetical protein VITISV_036283 [Vitis vinifera]
          Length = 756

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = -3

Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLK---- 173
           N+ +  + +G  L  F+   + ER++      F E  ++  RWNPE G     CL+    
Sbjct: 17  NLRVATLGKGLLLFDFELPDEAERVLARGLRIFKENVLVLERWNPEVG-----CLRKEPT 71

Query: 172 SKEVWLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLN 53
           +K+VW+   G+PLHL++ E+   +   CG     D++SL+
Sbjct: 72  AKDVWVRVIGLPLHLRSSEVFKRIGDECGGFIAADKSSLH 111


>emb|CBI14773.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = -3

Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLK---- 173
           N+ +  ME G+ L+ F+   + E+  KM ++  G  ++   +WNPE G     CLK    
Sbjct: 378 NLGLAKMERGKVLLEFEIPAEAEQASKMGNILLGGVDLCLEKWNPETG-----CLKEGER 432

Query: 172 SKEVWLSFTGVPLHLKTREIVTALTKACG 86
           S E W+   G+P+ L  R+I+  +  ACG
Sbjct: 433 SNEAWVRVVGLPVSLWERDILRKIGDACG 461


Top