BLASTX nr result
ID: Coptis23_contig00034363
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00034363 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI35378.3| unnamed protein product [Vitis vinifera] 59 4e-07 emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera] 57 2e-06 ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249... 55 4e-06 emb|CAN80237.1| hypothetical protein VITISV_036283 [Vitis vinifera] 55 6e-06 emb|CBI14773.3| unnamed protein product [Vitis vinifera] 55 8e-06 >emb|CBI35378.3| unnamed protein product [Vitis vinifera] Length = 1633 Score = 58.9 bits (141), Expect = 4e-07 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%) Frame = -3 Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLKSKEV 161 N+ I ++ G L +F+ + ER++ + + E+I +W+PE G + + + KE Sbjct: 18 NLNIDVLGGGCLLFVFECSSEAERVLSRGKRRVKDNELILEKWHPEVGCLG-NKVMVKEA 76 Query: 160 WLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLNCSSKK-----VRVK 26 W+ G+PLHL +RE+ + CG + DE + + ++ + VRVK Sbjct: 77 WVRVVGLPLHLWSREVFKLIGDGCGGLINVDEETFSMANLQWARLLVRVK 126 >emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera] Length = 1767 Score = 56.6 bits (135), Expect = 2e-06 Identities = 27/99 (27%), Positives = 53/99 (53%) Frame = -3 Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLKSKEV 161 N+ I ++ G L F+ + ER++ + + E+I +W+PE G + + + KE Sbjct: 225 NLNIDVLGGGFLLFEFECSSEAERVLTRGKRRVKDNELILEKWHPEVGCLG-NKVMVKEA 283 Query: 160 WLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLNCSS 44 W+ G+PLHL +RE+ + CG + DE +++ ++ Sbjct: 284 WVRVVGLPLHLWSREVFKLIGDGCGGLIKVDEKTVSMAN 322 >ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera] Length = 2143 Score = 55.5 bits (132), Expect = 4e-06 Identities = 27/99 (27%), Positives = 53/99 (53%) Frame = -3 Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLKSKEV 161 N+ I ++ G L F+ + ER++ + + E+I +W+PE G + + + KE Sbjct: 374 NLNIDVLGGGFLLFEFECSSEAERVLTRGKRRVKDNELIQEKWHPEVGCLG-NKVMVKEA 432 Query: 160 WLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLNCSS 44 W+ G+PLHL +RE+ + CG + DE +++ ++ Sbjct: 433 WVRVVGLPLHLWSREVFKLIGDGCGGLIKVDEKTVSMAN 471 >emb|CAN80237.1| hypothetical protein VITISV_036283 [Vitis vinifera] Length = 756 Score = 55.1 bits (131), Expect = 6e-06 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%) Frame = -3 Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLK---- 173 N+ + + +G L F+ + ER++ F E ++ RWNPE G CL+ Sbjct: 17 NLRVATLGKGLLLFDFELPDEAERVLARGLRIFKENVLVLERWNPEVG-----CLRKEPT 71 Query: 172 SKEVWLSFTGVPLHLKTREIVTALTKACGTMP*FDENSLN 53 +K+VW+ G+PLHL++ E+ + CG D++SL+ Sbjct: 72 AKDVWVRVIGLPLHLRSSEVFKRIGDECGGFIAADKSSLH 111 >emb|CBI14773.3| unnamed protein product [Vitis vinifera] Length = 609 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%) Frame = -3 Query: 340 NITIRIMEEGEALVIFQSEKDVERLIKMRHLQFGEGEIIFRRWNPEAGSIN*SCLK---- 173 N+ + ME G+ L+ F+ + E+ KM ++ G ++ +WNPE G CLK Sbjct: 378 NLGLAKMERGKVLLEFEIPAEAEQASKMGNILLGGVDLCLEKWNPETG-----CLKEGER 432 Query: 172 SKEVWLSFTGVPLHLKTREIVTALTKACG 86 S E W+ G+P+ L R+I+ + ACG Sbjct: 433 SNEAWVRVVGLPVSLWERDILRKIGDACG 461