BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034355
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEA39176.1| polyprotein [Dahlia mosaic virus]                      134   6e-30
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]                      134   8e-30
gb|ABW80581.1| polyprotein [Dahlia mosaic virus]                      131   5e-29
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]                  130   1e-28
ref|YP_001931961.1| replicase [Lamium leaf distortion virus] gi|...   123   2e-26

>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
          Length = 808

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +3

Query: 3   AVIRVISRFTIYLTPVKFLVRTDNKNLTYFLRNNVSGDNKQGRLIRWQAWFSRYSFAIEH 182
           AV   IS+F+IYLTPVKFLVRTDNKN TYFL+  +SGDNKQGRL+RWQ WFSRYSF IEH
Sbjct: 731 AVKNTISKFSIYLTPVKFLVRTDNKNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEH 790

Query: 183 LAGDKNVLADCLTRDFQS 236
           L G KNVLADCLTRDFQ+
Sbjct: 791 LEGPKNVLADCLTRDFQN 808


>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
          Length = 806

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +3

Query: 3   AVIRVISRFTIYLTPVKFLVRTDNKNLTYFLRNNVSGDNKQGRLIRWQAWFSRYSFAIEH 182
           AV   IS+F+IYLTPVKFLVRTDN+N TYFL+  +SGDNKQGRLIRWQ WFSRYSF IEH
Sbjct: 729 AVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLIRWQMWFSRYSFDIEH 788

Query: 183 LAGDKNVLADCLTRDFQS 236
           L G KNVLADCLTRDFQ+
Sbjct: 789 LEGSKNVLADCLTRDFQN 806


>gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
          Length = 812

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = +3

Query: 3   AVIRVISRFTIYLTPVKFLVRTDNKNLTYFLRNNVSGDNKQGRLIRWQAWFSRYSFAIEH 182
           AV   IS+F+IYLTPVKFLVRTDN+N TYFL+  +SGDNKQGRL+RWQ WFSRYSF IEH
Sbjct: 735 AVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEH 794

Query: 183 LAGDKNVLADCLTRDFQS 236
           L G KNVLADCL RDFQ+
Sbjct: 795 LEGSKNVLADCLPRDFQN 812


>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
          Length = 810

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/77 (77%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   AVIRVISRFTIYLTPVKFLVRTDNKNLTYFLRNNVSGDNKQGRLIRWQAWFSRYSFAIEH 182
           AV   IS+F+IYLTPVKFLVRTD+KN TYFL+  +SGDNKQGRL+RWQ WFSRY+F IEH
Sbjct: 733 AVKNAISKFSIYLTPVKFLVRTDSKNFTYFLKTKISGDNKQGRLVRWQMWFSRYTFDIEH 792

Query: 183 LAGDKNVLADCLTRDFQ 233
           L G KNVLADCLTRDFQ
Sbjct: 793 LEGLKNVLADCLTRDFQ 809


>ref|YP_001931961.1| replicase [Lamium leaf distortion virus]
           gi|172041757|gb|ACB69767.1| replicase [Lamium leaf
           distortion virus]
          Length = 696

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/78 (69%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   AVIRVISRFTIYLTPVKFLVRTDNKNLTYFLRNNVSGDNKQGRLIRWQAWFSRYSFAIEH 182
           AVIRVI++FTIYLTP++FL+RTDNKN T+F+  NV GD KQGRL+RWQ W SRYSF +EH
Sbjct: 613 AVIRVIAKFTIYLTPLEFLIRTDNKNFTFFMNTNVKGDYKQGRLVRWQQWLSRYSFKVEH 672

Query: 183 LAGDKNVLADCLTRDFQS 236
           + G KN+ AD LTR+FQS
Sbjct: 673 ITGVKNIFADFLTREFQS 690