BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034352
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   139   2e-32
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi...   142   2e-32
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...   140   1e-31
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             140   1e-31
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...   140   1e-31

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  139 bits (350), Expect(2) = 2e-32
 Identities = 66/129 (51%), Positives = 91/129 (70%)
 Frame = -1

Query: 431 MVKYFFQHGTFGKEINHTFLVLIPKIGRPTKVEHFRPISLTNVTYRIISKIMVNRMRSIL 252
           +V  F Q G F K +N T + LIPK  RPT++   RPISL NV Y++ISKI+  R++++L
Sbjct: 254 LVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVL 313

Query: 251 TSIISPNQSAFLPGRLIHDNVLLAHEAFHQIRGKKNKKHHFYALKFDMRKAYDKLEWSFI 72
            ++IS  QSAF+ GRLI DN+L+A E FH +R   + K  F A+K DM KAYD++EW+FI
Sbjct: 314 PNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFI 373

Query: 71  EPVLKKFGF 45
           E +L+K GF
Sbjct: 374 EALLRKMGF 382



 Score = 25.0 bits (53), Expect(2) = 2e-32
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 60  KEIWFCMFCITSLSYSVLVN 1
           K I + M+CIT++ Y VL+N
Sbjct: 385 KWISWIMWCITTVQYKVLIN 404


>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
          Length = 1300

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/129 (51%), Positives = 92/129 (71%)
 Frame = -1

Query: 428 VKYFFQHGTFGKEINHTFLVLIPKIGRPTKVEHFRPISLTNVTYRIISKIMVNRMRSILT 249
           VK FF  G    ++N T +VLIPK+ +P++++ FRPISL NV Y+++SK +VNRMR IL 
Sbjct: 393 VKEFFHTGVMPDDVNETTIVLIPKVAQPSQLKDFRPISLCNVLYKVVSKCLVNRMRPILD 452

Query: 248 SIISPNQSAFLPGRLIHDNVLLAHEAFHQIRGKKNKKHHFYALKFDMRKAYDKLEWSFIE 69
            ++SPNQSAF+PGRLI DN LLA E FH I+  ++  +   A K D+ KAYD+++W F+E
Sbjct: 453 EVVSPNQSAFVPGRLITDNALLAFECFHFIQKNRSPNNAACAYKLDLSKAYDRVDWRFLE 512

Query: 68  PVLKKFGFA 42
             + K GFA
Sbjct: 513 QAMYKMGFA 521


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/129 (51%), Positives = 91/129 (70%)
 Frame = -1

Query: 428  VKYFFQHGTFGKEINHTFLVLIPKIGRPTKVEHFRPISLTNVTYRIISKIMVNRMRSILT 249
            V+ FF  GT    +N T +VLIPK  +P +++ FRPISL NV Y+I+SK +VNR+R IL 
Sbjct: 1042 VQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILD 1101

Query: 248  SIISPNQSAFLPGRLIHDNVLLAHEAFHQIRGKKNKKHHFYALKFDMRKAYDKLEWSFIE 69
             ++S NQSAF+PGRLI DN L+A E FH I+  KN ++ + A K D+ KAYD+++W F+E
Sbjct: 1102 DLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVDWEFLE 1161

Query: 68   PVLKKFGFA 42
              + K GFA
Sbjct: 1162 QAMVKLGFA 1170


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/129 (53%), Positives = 90/129 (69%)
 Frame = -1

Query: 431 MVKYFFQHGTFGKEINHTFLVLIPKIGRPTKVEHFRPISLTNVTYRIISKIMVNRMRSIL 252
           +V  F Q G F K++N T + LIPK  RPT++   RPISL NV Y+IISKI+  R++ IL
Sbjct: 320 LVNSFLQDGVFDKQLNTTNICLIPKTERPTRMTELRPISLCNVGYKIISKILCQRLKKIL 379

Query: 251 TSIISPNQSAFLPGRLIHDNVLLAHEAFHQIRGKKNKKHHFYALKFDMRKAYDKLEWSFI 72
            S+IS   SAF+ GRLI DN+L+A E FH +R   + K  F A+K DM KAYD++EW+FI
Sbjct: 380 PSLISETHSAFVEGRLISDNILIAQEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVEWNFI 439

Query: 71  EPVLKKFGF 45
           E +LKK GF
Sbjct: 440 EELLKKMGF 448


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/129 (51%), Positives = 91/129 (70%)
 Frame = -1

Query: 428  VKYFFQHGTFGKEINHTFLVLIPKIGRPTKVEHFRPISLTNVTYRIISKIMVNRMRSILT 249
            V+ FF  GT    +N T +VLIPK  +P +++ FRPISL NV Y+I+SK +VNR+R IL 
Sbjct: 1007 VQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILD 1066

Query: 248  SIISPNQSAFLPGRLIHDNVLLAHEAFHQIRGKKNKKHHFYALKFDMRKAYDKLEWSFIE 69
             ++S NQSAF+PGRLI DN L+A E FH I+  KN ++ + A K D+ KAYD+++W F+E
Sbjct: 1067 DLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVDWEFLE 1126

Query: 68   PVLKKFGFA 42
              + K GFA
Sbjct: 1127 QAMVKLGFA 1135