BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034349
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557546.1| PREDICTED: 40S ribosomal protein S18-like [B...    67   1e-09
ref|XP_003557516.1| PREDICTED: 40S ribosomal protein S18-like [B...    67   1e-09
pdb|3IZ6|M Chain M, Localization Of The Small Subunit Ribosomal ...    67   1e-09
ref|XP_004140957.1| PREDICTED: 40S ribosomal protein S18-like [C...    66   3e-09
ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [C...    66   3e-09

>ref|XP_003557546.1| PREDICTED: 40S ribosomal protein S18-like [Brachypodium distachyon]
          Length = 152

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   HRGLRHYWGVWVHGQHTKTTSRRGKTVGVSKKR 99
           HRGLRHYWGV V GQHTKTT RRGKTVGVSKKR
Sbjct: 120 HRGLRHYWGVRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_003557516.1| PREDICTED: 40S ribosomal protein S18-like [Brachypodium distachyon]
          Length = 152

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   HRGLRHYWGVWVHGQHTKTTSRRGKTVGVSKKR 99
           HRGLRHYWGV V GQHTKTT RRGKTVGVSKKR
Sbjct: 120 HRGLRHYWGVRVRGQHTKTTGRRGKTVGVSKKR 152


>pdb|3IZ6|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome gi|22204120|gb|AAM92708.1| putative ribosomal
           protein S18 [Triticum aestivum]
          Length = 152

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   HRGLRHYWGVWVHGQHTKTTSRRGKTVGVSKKR 99
           HRGLRHYWGV V GQHTKTT RRGKTVGVSKKR
Sbjct: 120 HRGLRHYWGVRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_004140957.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
          Length = 137

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   HRGLRHYWGVWVHGQHTKTTSRRGKTVGVSKKR 99
           HRGLRHYWG+ V GQHTKTT RRGKTVGVSKKR
Sbjct: 105 HRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 137


>ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
           gi|449525091|ref|XP_004169553.1| PREDICTED: 40S
           ribosomal protein S18-like [Cucumis sativus]
          Length = 152

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   HRGLRHYWGVWVHGQHTKTTSRRGKTVGVSKKR 99
           HRGLRHYWG+ V GQHTKTT RRGKTVGVSKKR
Sbjct: 120 HRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152