BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034340
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
ref|XP_002525361.1| polygalacturonase, putative [Ricinus communi...   181   2e-43
ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti...   175   9e-42
ref|XP_003613215.1| Polygalacturonase [Medicago truncatula] gi|3...   174   2e-41
ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ...   173   3e-41

>ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|222851593|gb|EEE89140.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  184 bits (467), Expect = 1e-44
 Identities = 91/167 (54%), Positives = 114/167 (68%), Gaps = 5/167 (2%)
 Frame = -3

Query: 486 LKMSSFSLKSFAFILLIAFLVWSSTFELCIARSGKHWRXXXXXXXXXXXXXXXSHGSNHH 307
           + M  FS +S AF+L I FLVWS++F+ CIAR GKHWR               SHG++HH
Sbjct: 2   VNMRGFSFRSLAFMLFIVFLVWSASFDTCIARRGKHWRQSRSNPASLAKKKGKSHGNSHH 61

Query: 306 QNNRGNSNPKSPPPSYTG-----PKKKNPTPPAKEDNGRNSAIFNVLKFGAKGDGNVDDT 142
           Q++ G S PK+PP          PK+K P P   +   + S  FNVL FGAKG+G  DDT
Sbjct: 62  QHHSGVSKPKAPPHKAPALPPPAPKEKAPKPSPPQ---KGSTTFNVLDFGAKGNGKSDDT 118

Query: 141 KAFETAWAAACKVKASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLD 1
           KAF+ AWAAACKV+AST++VP++YVFLVGP+SFSGPYCQ +IVFQLD
Sbjct: 119 KAFQAAWAAACKVEASTLIVPAEYVFLVGPISFSGPYCQANIVFQLD 165


>ref|XP_002525361.1| polygalacturonase, putative [Ricinus communis]
           gi|223535324|gb|EEF36999.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 519

 Score =  181 bits (458), Expect = 2e-43
 Identities = 96/170 (56%), Positives = 115/170 (67%), Gaps = 10/170 (5%)
 Frame = -3

Query: 480 MSSFSLKSFAFILLIAFLVWSSTFELCIARSGKHWRXXXXXXXXXXXXXXXS-HGS--NH 310
           M+  SL+S  F+  IAFLVWSS+FE CIAR G+HWR                 HGS  NH
Sbjct: 1   MTGVSLRSLTFMFFIAFLVWSSSFETCIARRGRHWRHGRGTSASLYNKRKGKSHGSSSNH 60

Query: 309 HQNNRGNSNPKSP-------PPSYTGPKKKNPTPPAKEDNGRNSAIFNVLKFGAKGDGNV 151
           HQ+N+G S PK P       PP+ T PK  +  PP+     + SA FNVL FGAKGDG  
Sbjct: 61  HQHNKG-SKPKPPSHKAPLLPPAPTPPK--DDAPPSSSSPIKGSATFNVLNFGAKGDGKT 117

Query: 150 DDTKAFETAWAAACKVKASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLD 1
           DDTKAF+ AWAAACKV+AST+LVP++Y+FLVGPVSFSGPYCQ +IVFQL+
Sbjct: 118 DDTKAFQAAWAAACKVEASTMLVPAEYIFLVGPVSFSGPYCQANIVFQLN 167


>ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|297739064|emb|CBI28553.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score =  175 bits (443), Expect = 9e-42
 Identities = 89/160 (55%), Positives = 106/160 (66%)
 Frame = -3

Query: 480 MSSFSLKSFAFILLIAFLVWSSTFELCIARSGKHWRXXXXXXXXXXXXXXXSHGSNHHQN 301
           MS  S +  AF+LL AFLVWSS+   C AR GKHWR               SHGS  H +
Sbjct: 1   MSGLSFRRLAFMLLFAFLVWSSSTGTCHARRGKHWRHSRAASASLSKKKAKSHGSGSHHH 60

Query: 300 NRGNSNPKSPPPSYTGPKKKNPTPPAKEDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAW 121
               S PK+P      P K+  TPP  E  G  S  FNVL FGAKGDG+ DDTKAF++AW
Sbjct: 61  GGSKSKPKAP-----SPPKQEVTPPPPEKKG--SETFNVLDFGAKGDGDTDDTKAFQSAW 113

Query: 120 AAACKVKASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLD 1
           A+ACKV+AST++VPS+YVFLVGP+SFSGPYC+ +IVFQLD
Sbjct: 114 ASACKVEASTIVVPSEYVFLVGPISFSGPYCEANIVFQLD 153


>ref|XP_003613215.1| Polygalacturonase [Medicago truncatula] gi|355514550|gb|AES96173.1|
           Polygalacturonase [Medicago truncatula]
          Length = 543

 Score =  174 bits (440), Expect = 2e-41
 Identities = 89/182 (48%), Positives = 109/182 (59%), Gaps = 24/182 (13%)
 Frame = -3

Query: 480 MSSFSLKSFAFILLIAFLVWSSTFELCIARSGKHWRXXXXXXXXXXXXXXXSHGSNHHQN 301
           MS FSL+ F ++LLIAFL+WSS FE CIAR GKH R               S+  N H  
Sbjct: 1   MSGFSLRGFTYMLLIAFLIWSSNFECCIARRGKHLRQSRTFSSSLFKKKGKSYNGNSHNK 60

Query: 300 NR----GNSNPKSPPPSYTGPKKKNPT--------------------PPAKEDNGRNSAI 193
           N      NS PKSPP   T P  K+P                     PP K +NG +S  
Sbjct: 61  NHHSGGSNSKPKSPPHKSTPPLPKSPPSHKSVPSSPPISKPKYSPSIPPPKANNGVHSTF 120

Query: 192 FNVLKFGAKGDGNVDDTKAFETAWAAACKVKASTVLVPSDYVFLVGPVSFSGPYCQPDIV 13
           FNVL +GAKGDGN DDTKAF+  WAA CKV+AST+++P++Y+F VGP+SFSGPYC+ +IV
Sbjct: 121 FNVLDYGAKGDGNTDDTKAFQATWAATCKVEASTMVIPANYIFYVGPISFSGPYCKANIV 180

Query: 12  FQ 7
           FQ
Sbjct: 181 FQ 182


>ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 505

 Score =  173 bits (438), Expect = 3e-41
 Identities = 89/159 (55%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
 Frame = -3

Query: 468 SLKSFAFILLIAFLVWSSTFELCIARSGKHWRXXXXXXXXXXXXXXXSHGSNHHQNNRGN 289
           S KS   ++ IAFLVWSS FE CIAR GKHWR                 GS +H +    
Sbjct: 2   SSKSLTLVVFIAFLVWSSNFEACIARRGKHWRQNRDASASLSKKKGSHGGSKNHHSGA-- 59

Query: 288 SNPKSPPPSYTGPKKKNP---TPPAKEDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWA 118
                 PPS   PK K     TPP K  +  +SAIFNVL FGAKG+G  DDTKAFE AWA
Sbjct: 60  ------PPSPLPPKPKEEIVQTPPKKGPSAGDSAIFNVLDFGAKGNGETDDTKAFEDAWA 113

Query: 117 AACKVKASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLD 1
            ACKV+ STV+VP+DYVF VGP+SFSGPYCQPDI+FQLD
Sbjct: 114 EACKVEGSTVMVPADYVFFVGPISFSGPYCQPDIIFQLD 152