BLASTX nr result

ID: Coptis23_contig00034330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034330
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525841.1| Ent-kaurene synthase B, chloroplast precurso...    92   6e-17
ref|XP_002525836.1| Ent-kaurene synthase B, chloroplast precurso...    91   1e-16
ref|XP_002311286.1| ent-kaurene synthase [Populus trichocarpa] g...    90   2e-16
gb|AEF32083.1| ent-kaurene synthase [Castanea mollissima]              87   2e-15
ref|XP_002533694.1| Ent-kaurene synthase B, chloroplast precurso...    86   2e-15

>ref|XP_002525841.1| Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus
           communis] gi|223534846|gb|EEF36535.1| Ent-kaurene
           synthase B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 778

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/95 (49%), Positives = 67/95 (70%)
 Frame = +1

Query: 1   GKPNGVSLLMIHVPTVSTEEEAIQKLRDTIDSSRCELMKVLLRTEVNILQRACKDLFWMM 180
           GK N V+L +I+     TEEE  +K+  TIDS+R EL++++ +TE +I+ +ACKD FW M
Sbjct: 684 GKLNIVTLEVINGKGAITEEEVQEKVARTIDSNRRELLRMVSQTEGSIVPKACKDFFWTM 743

Query: 181 CSVVHLFYMSDDGFSSIEQMVSVVKAVMYVPPTLP 285
            +V+HLFYM DDG+SS  +M+S V AV+  P  LP
Sbjct: 744 SNVLHLFYMGDDGYSSPTKMMSAVNAVINEPIVLP 778


>ref|XP_002525836.1| Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus
            communis] gi|223534841|gb|EEF36530.1| Ent-kaurene
            synthase B, chloroplast precursor, putative [Ricinus
            communis]
          Length = 816

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/97 (43%), Positives = 68/97 (70%)
 Frame = +1

Query: 1    GKPNGVSLLMIHVPTVSTEEEAIQKLRDTIDSSRCELMKVLLRTEVNILQRACKDLFWMM 180
            GK N VSL +IH   + TEEEA++++   I+  R EL+++++ TE +I+ +ACKD+FW+M
Sbjct: 720  GKQNSVSLQVIHGNGIITEEEAVKEVTRMIEYHRRELLRMVVETEGSIVPKACKDVFWLM 779

Query: 181  CSVVHLFYMSDDGFSSIEQMVSVVKAVMYVPPTLPQQ 291
              ++HLFYMSDDG+SS  +M+    A++  P  + Q+
Sbjct: 780  SRILHLFYMSDDGYSSPTKMIHAADAIINEPIIVSQK 816


>ref|XP_002311286.1| ent-kaurene synthase [Populus trichocarpa]
           gi|222851106|gb|EEE88653.1| ent-kaurene synthase
           [Populus trichocarpa]
          Length = 743

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/96 (46%), Positives = 66/96 (68%)
 Frame = +1

Query: 1   GKPNGVSLLMIHVPTVSTEEEAIQKLRDTIDSSRCELMKVLLRTEVNILQRACKDLFWMM 180
           GK N +SL MIH    STEEE I+  +  IDS R +L++++L+ + +I+ R CKDLFW M
Sbjct: 648 GKLNAISLYMIHSGGASTEEETIEHFKGLIDSQRRQLLQLVLQEKDSIIPRPCKDLFWNM 707

Query: 181 CSVVHLFYMSDDGFSSIEQMVSVVKAVMYVPPTLPQ 288
             ++H FYM DDGF+S  +M +VVKA++  P +L +
Sbjct: 708 IKLLHTFYMKDDGFTS-NEMRNVVKAIINEPISLDE 742


>gb|AEF32083.1| ent-kaurene synthase [Castanea mollissima]
          Length = 784

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/94 (48%), Positives = 63/94 (67%)
 Frame = +1

Query: 1   GKPNGVSLLMIHVPTVSTEEEAIQKLRDTIDSSRCELMKVLLRTEVNILQRACKDLFWMM 180
           GK N VSL MIH     T+EE I++L+  I   R EL+K++L+ + +++ RACKDLFW M
Sbjct: 689 GKLNAVSLCMIHGGGDCTKEETIKELKSFIAGKRRELLKLVLQEKGSVVPRACKDLFWKM 748

Query: 181 CSVVHLFYMSDDGFSSIEQMVSVVKAVMYVPPTL 282
             V+HLFYM DDGF+S  +M + V AV+  P  L
Sbjct: 749 IKVLHLFYMKDDGFTS-HEMFNSVNAVLEEPIVL 781


>ref|XP_002533694.1| Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus
           communis] gi|223526405|gb|EEF28689.1| Ent-kaurene
           synthase B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 808

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/91 (49%), Positives = 62/91 (68%)
 Frame = +1

Query: 1   GKPNGVSLLMIHVPTVSTEEEAIQKLRDTIDSSRCELMKVLLRTEVNILQRACKDLFWMM 180
           GK N VSL MI       EEEAI+K++  I+S R EL++++LR + + + RACKDLFW M
Sbjct: 643 GKLNAVSLHMIQGNGGVNEEEAIRKIKGLINSQRSELLRLVLREKNSNIPRACKDLFWKM 702

Query: 181 CSVVHLFYMSDDGFSSIEQMVSVVKAVMYVP 273
             V+HLFY+ DDGF+S  +M+S   AV+  P
Sbjct: 703 IKVLHLFYLKDDGFTS-NEMISTANAVITEP 732


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