BLASTX nr result
ID: Coptis23_contig00034294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00034294
(240 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB71316.1| unnamed protein product [Homo sapiens] 111 5e-23
ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel... 110 2e-22
gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata] 109 3e-22
ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana] gi|33219624... 108 3e-22
emb|CAA66667.1| polyubiquitin [Pinus sylvestris] 108 3e-22
>dbj|BAB71316.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 111 bits (278), Expect = 5e-23
Identities = 62/86 (72%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVE D ++NV+ +Q KEGIPPDQQRLI
Sbjct: 259 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 318
Query: 182 FISKQLEDGR-------NNKAKIQDK 238
F KQLEDGR N KAKIQDK
Sbjct: 319 FAGKQLEDGRTLSDTIENVKAKIQDK 344
Score = 104 bits (259), Expect = 9e-21
Identities = 54/70 (77%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVE D ++NV+ +Q KEGIPPDQQRLI
Sbjct: 107 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 166
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 167 FAGKQLEDGR 176
Score = 104 bits (259), Expect = 9e-21
Identities = 54/70 (77%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVE D ++NV+ +Q KEGIPPDQQRLI
Sbjct: 183 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 242
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 243 FAGKQLEDGR 252
Score = 78.2 bits (191), Expect = 7e-13
Identities = 46/79 (58%), Positives = 52/79 (65%), Gaps = 17/79 (21%)
Frame = +2
Query: 53 LQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLIFISKQLEDGR------ 211
+Q FV+TLT KTITLEVE D ++NV+ +Q KEGIPPDQQRLIF KQLEDGR
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 212 ----------NNKAKIQDK 238
N KAKIQDK
Sbjct: 61 IQKEPSDTIENVKAKIQDK 79
>ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638291|emb|CAZ86225.1| unnamed protein product
[Tuber melanosporum]
Length = 305
Score = 110 bits (274), Expect = 2e-22
Identities = 57/70 (81%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+G +Q KEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLI 120
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 121 FAGKQLEDGR 130
Score = 110 bits (274), Expect = 2e-22
Identities = 57/70 (81%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+G +Q KEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLI 196
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 197 FAGKQLEDGR 206
Score = 110 bits (274), Expect = 2e-22
Identities = 57/70 (81%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+G +Q KEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLI 272
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 273 FAGKQLEDGR 282
Score = 77.8 bits (190), Expect = 9e-13
Identities = 40/54 (74%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 53 LQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLIFISKQLEDGR 211
+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLIF KQLEDGR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 54
>gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
Length = 458
Score = 109 bits (272), Expect = 3e-22
Identities = 56/70 (80%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES+D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESLDTIDNVKAQIQDKEGIPPDQQRLI 348
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 349 FAGKQLEDGR 358
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 121 FAGKQLEDGR 130
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 197 FAGKQLEDGR 206
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 273 FAGKQLEDGR 282
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 425 FAGKQLEDGR 434
Score = 77.8 bits (190), Expect = 9e-13
Identities = 40/54 (74%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 53 LQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLIFISKQLEDGR 211
+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLIF KQLEDGR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
>ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana] gi|332196241|gb|AEE34362.1|
ubiquitin 13 [Arabidopsis thaliana]
Length = 319
Score = 108 bits (271), Expect = 3e-22
Identities = 58/77 (75%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 182 FISKQLEDGRNNKAKIQ 232
F KQLEDGR IQ
Sbjct: 121 FAGKQLEDGRTLADNIQ 137
Score = 104 bits (260), Expect = 7e-21
Identities = 55/70 (78%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KE IPPDQQRLI
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLI 195
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 196 FAGKQLEDGR 205
Score = 100 bits (249), Expect = 1e-19
Identities = 53/69 (76%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES +DNV+ +Q KEGIPPDQQRLI
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLI 271
Query: 182 FISKQLEDG 208
F KQLE G
Sbjct: 272 FAGKQLEGG 280
Score = 77.8 bits (190), Expect = 9e-13
Identities = 40/54 (74%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 53 LQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLIFISKQLEDGR 211
+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLIF KQLEDGR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54
>emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
Length = 761
Score = 108 bits (271), Expect = 3e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 728
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 729 FAGKQLEDGR 738
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 197 FAGKQLEDGR 206
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 273 FAGKQLEDGR 282
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 348
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 349 FAGKQLEDGR 358
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 425 FAGKQLEDGR 434
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 500
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 501 FAGKQLEDGR 510
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 576
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 577 FAGKQLEDGR 586
Score = 107 bits (268), Expect = 8e-22
Identities = 56/70 (80%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 652
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 653 FAGKQLEDGR 662
Score = 106 bits (265), Expect = 2e-21
Identities = 55/70 (78%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 IQKESTLHLVLRLRGGLQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLI 181
IQKESTLHLVLRLRGG+Q FV+TLT KTITLEVE+ D +DNV+ +Q KEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 182 FISKQLEDGR 211
F KQLEDGR
Sbjct: 121 FAGKQLEDGR 130
Score = 77.8 bits (190), Expect = 9e-13
Identities = 40/54 (74%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 53 LQFFVQTLTVKTITLEVESIDAVDNVEG-LQYKEGIPPDQQRLIFISKQLEDGR 211
+Q FV+TLT KTITLEVES D +DNV+ +Q KEGIPPDQQRLIF KQLEDGR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 54