BLASTX nr result

ID: Coptis23_contig00034292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034292
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600697.1| hypothetical protein MTR_3g065200 [Medicago ...    69   3e-10
emb|CBI36677.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_003595907.1| hypothetical protein MTR_2g063280 [Medicago ...    62   5e-08
emb|CBI17230.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|NP_187523.2| uncharacterized protein [Arabidopsis thaliana] ...    61   8e-08

>ref|XP_003600697.1| hypothetical protein MTR_3g065200 [Medicago truncatula]
           gi|355489745|gb|AES70948.1| hypothetical protein
           MTR_3g065200 [Medicago truncatula]
          Length = 453

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = -2

Query: 315 DDSESTKYYMCPE-SMCSYDMLSTIRNSKCRCGEIMSEEKNISVD--CDGFLKRMTNKFI 145
           D +E T+Y++    + C Y  LS+ +N +C CG ++    ++  D  C+GF+K   N FI
Sbjct: 86  DATEPTRYFLYSNVAKCEYRFLSSFKNLRCECGSVLDRFVSVESDKVCNGFVKDSPN-FI 144

Query: 144 VTDDLQVMPVSTTVAAFTLLKGYGVGEKSKLEKQPVDIGPDEVLLLLK 1
           VTDDL V+P S   A F LLK +G+   S +++  +DI   +VL LLK
Sbjct: 145 VTDDLTVLPNSMD-ANFGLLKRFGIKSTSLVKEVNMDITEKQVLDLLK 191


>emb|CBI36677.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
 Frame = -2

Query: 315 DDSESTKYYMCPESMC--------SYDMLSTIRNSKCRCGEIMSEEKNIS-----VDCDG 175
           DD+E TK YMC +  C        +Y + S + NSKC CG+ M +E  +      +D +G
Sbjct: 21  DDTEPTKIYMCSKLFCPIKTPNKKAYCLSSMVENSKCSCGQEMDKEVFLEYQEGIIDGNG 80

Query: 174 -FLKRMTNKFIVTDDLQVMPV--STTVAAFTLLKGYGVGEKSKLEKQPVDIGPDEVLLLL 4
            F+K  +  F++TDDL + PV  S ++AAF  L+   +   + +E + V +  +EVL LL
Sbjct: 81  AFMKGTSRMFMITDDLHITPVSMSDSLAAFRKLR---LESGNGIEVRTVTVDEEEVLHLL 137

Query: 3   K 1
           K
Sbjct: 138 K 138


>ref|XP_003595907.1| hypothetical protein MTR_2g063280 [Medicago truncatula]
           gi|355484955|gb|AES66158.1| hypothetical protein
           MTR_2g063280 [Medicago truncatula]
          Length = 512

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
 Frame = -2

Query: 315 DDSESTK-YYMCPESMC-SYD---MLSTIRNSKCRCGEIMSEEKNISVDCD-GFLKRMTN 154
           D++ES K YY+C    C S D    LS  RN KC CG+ ++ EK+  +  + GF+K M+ 
Sbjct: 111 DNTESLKSYYLCENVSCLSVDHKYCLSYFRNQKCICGKPLNREKSRILSKEIGFVKEMST 170

Query: 153 KFIVTDDLQVMPVSTTVAAFTLLKGYGVGEKSKLEKQPVDIG--PDEVLLLLK 1
            FI++DDL VMP +   A+  LL+  GV +   ++KQ V I     EV+ LLK
Sbjct: 171 -FIISDDLYVMP-NVVTASLNLLQKLGVNDIDAIDKQTVSINITKKEVVDLLK 221


>emb|CBI17230.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
 Frame = -2

Query: 315 DDSESTKYYMCPESMC--------SYDMLSTIRNSKCRCGEIMSEEKNIS-----VDCDG 175
           DD+E TK YMC +  C        +Y + S + NS+C CG+ M +E  +      +D +G
Sbjct: 21  DDTEPTKIYMCSKLFCPIKTPNKKAYCLSSIVENSECSCGQAMDKEVFLEYQEGIIDGNG 80

Query: 174 -FLKRMTNKFIVTDDLQVMPVSTTVAAFTLLKGYGVGEKSKLEKQPVDIGPDEVLLLLK 1
            F+K  +  F++TDDL + PVS +  +  + +   +   + +E + V +  +EVL LLK
Sbjct: 81  VFMKGTSRMFMITDDLHITPVSMS-DSLAMFRKLRLESGNGIEVRTVTVDEEEVLHLLK 138


>ref|NP_187523.2| uncharacterized protein [Arabidopsis thaliana]
           gi|55740621|gb|AAV63903.1| hypothetical protein
           [Arabidopsis thaliana] gi|332641203|gb|AEE74724.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 343

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = -2

Query: 315 DDSESTKYYMCPESMCS---YDMLSTIRNSKCRCGEIMSEEKNI-SVDCDGFLKRMTNKF 148
           DD+E+TK+++CP  + +     + S +   KCRCG  M  E  +     DG        F
Sbjct: 108 DDTEATKFFVCPNFVSTEACRKLFSNVSTMKCRCGSSMHREIPVEEQQADGVFPSCRTSF 167

Query: 147 IVTDDLQVMPVSTTVAAFTLLKGYGVGEKSKLEKQPVDIGPDEVLLLL 4
           ++TDDL+V  +++      +L  +G     KL++  +D+G +E+L LL
Sbjct: 168 VITDDLKV-ALNSMGLVLNVLNDFGYSGFDKLQEMLIDVGFEEILTLL 214


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