BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034291
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   110   9e-23
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   104   7e-21
ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/89 (57%), Positives = 68/89 (76%)
 Frame = +2

Query: 11  GPTVWGALLGACIIHRDIEVGDIIAKRFAARIECLSDGEYVMLVNLYASCGRWDEANRWR 190
           G  + GALL ACI+H+D+EVG+ + K  ++R   LSDGE +M  NLYASCG+W+EAN+WR
Sbjct: 412 GEAILGALLSACIVHQDLEVGERVVKLVSSRGNYLSDGELMMFSNLYASCGQWEEANKWR 471

Query: 191 AMMHDLDINKTSGNSMIEVNGTMYKFLAG 277
            MM+D  I KT+G S++EVNG  +KFLAG
Sbjct: 472 EMMNDTGIVKTAGFSVVEVNGKFHKFLAG 500


>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/93 (52%), Positives = 68/93 (73%)
 Frame = +2

Query: 5   EHGPTVWGALLGACIIHRDIEVGDIIAKRFAARIECLSDGEYVMLVNLYASCGRWDEANR 184
           E G ++ GALLGAC+IH+D+E G+ +     ++   +SDGE++M VNLYASCG+W EANR
Sbjct: 414 EPGESILGALLGACVIHQDLETGEKVINLITSKAHHVSDGEFMMFVNLYASCGQWKEANR 473

Query: 185 WRAMMHDLDINKTSGNSMIEVNGTMYKFLAGHL 283
           WR  M++  I KT+G S IEV+G  Y+FLAG +
Sbjct: 474 WRERMNESGIAKTAGGSTIEVDGKFYRFLAGDI 506


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/93 (52%), Positives = 68/93 (73%)
 Frame = +2

Query: 5    EHGPTVWGALLGACIIHRDIEVGDIIAKRFAARIECLSDGEYVMLVNLYASCGRWDEANR 184
            E G ++ GALLGAC+IH+D+E G+ +     ++   +SDGE++M VNLYASCG+W EANR
Sbjct: 1199 EPGESILGALLGACVIHQDLETGEKVIBLITSKAHHVSDGEFMMFVNLYASCGQWKEANR 1258

Query: 185  WRAMMHDLDINKTSGNSMIEVNGTMYKFLAGHL 283
            WR  M++  I KT+G S IEV+G  Y+FLAG +
Sbjct: 1259 WRERMNESGIAKTAGGSTIEVDGKFYRFLAGDI 1291


>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/93 (52%), Positives = 66/93 (70%)
 Frame = +2

Query: 5   EHGPTVWGALLGACIIHRDIEVGDIIAKRFAARIECLSDGEYVMLVNLYASCGRWDEANR 184
           E G ++ GALL ACII++D+E G+ + +   ++   LSDGE +M  NLYASCG W+EANR
Sbjct: 410 EPGESILGALLSACIIYQDLETGERVIELVCSKAHYLSDGELMMFSNLYASCGNWEEANR 469

Query: 185 WRAMMHDLDINKTSGNSMIEVNGTMYKFLAGHL 283
           WR MM+   I KT+G S+IEV+G   KFLAG +
Sbjct: 470 WREMMNSTGIVKTAGYSVIEVSGRFQKFLAGEV 502


>ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|222839060|gb|EEE77411.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/87 (47%), Positives = 60/87 (68%)
 Frame = +2

Query: 17  TVWGALLGACIIHRDIEVGDIIAKRFAARIECLSDGEYVMLVNLYASCGRWDEANRWRAM 196
           TV G LLGAC  HR+IE+G+ I +R    +E  + G YV+L NLYA+ G+W++A + R +
Sbjct: 427 TVLGTLLGACKKHRNIELGEEIGRR-VIELEPNNSGRYVLLANLYANAGKWEDAAKVRKL 485

Query: 197 MHDLDINKTSGNSMIEVNGTMYKFLAG 277
           M D  + K  G SMIE+ GT+++F+AG
Sbjct: 486 MDDRGVKKAPGFSMIELQGTVHEFIAG 512