BLASTX nr result
ID: Coptis23_contig00034287
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00034287
(552 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP32198.1| cysteine protease 12 [Trifolium repens] 84 6e-40
gb|AAP32195.1| cysteine protease 5 [Trifolium repens] 84 6e-40
ref|XP_003607574.1| Cysteine protease [Medicago truncatula] gi|3... 82 3e-39
ref|XP_002316833.1| predicted protein [Populus trichocarpa] gi|2... 147 2e-37
dbj|BAF56428.1| cysteine proteinase [Lotus japonicus] 140 2e-35
>gb|AAP32198.1| cysteine protease 12 [Trifolium repens]
Length = 343
Score = 84.3 bits (207), Expect(4) = 6e-40
Identities = 41/54 (75%), Positives = 49/54 (90%)
Frame = -1
Query: 507 KGITQISTGKLISLSEQELVDCADTSGQDQGCEGGLMEDAFEFIQQNKGLATEA 346
+GI +ISTGKL+SLSEQELVDC DT+G DQGCEGGLM+DAF+FI QN G++TEA
Sbjct: 159 EGIHKISTGKLVSLSEQELVDC-DTNGVDQGCEGGLMDDAFKFIIQNNGISTEA 211
Score = 77.4 bits (189), Expect(4) = 6e-40
Identities = 36/51 (70%), Positives = 40/51 (78%), Gaps = 4/51 (7%)
Frame = -1
Query: 189 ANQASGSAFQFYSSG----DCGIDLDHGVTAVGFGATSDGTKYWLVKNSWG 49
A ASGS FQFY SG CG +LDHGVTAVG+G ++DGTKYWLVKNSWG
Sbjct: 260 AIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWLVKNSWG 310
Score = 35.8 bits (81), Expect(4) = 6e-40
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 544 GCCWAFYAVAATEGYH 497
GCCWAF A+AATEG H
Sbjct: 147 GCCWAFSAIAATEGIH 162
Score = 32.7 bits (73), Expect(4) = 6e-40
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3
Query: 247 AQINGYEDVPVNNENAL 197
A I GYEDVP NNENAL
Sbjct: 232 ATITGYEDVPANNENAL 248
>gb|AAP32195.1| cysteine protease 5 [Trifolium repens]
Length = 343
Score = 84.3 bits (207), Expect(4) = 6e-40
Identities = 41/54 (75%), Positives = 49/54 (90%)
Frame = -1
Query: 507 KGITQISTGKLISLSEQELVDCADTSGQDQGCEGGLMEDAFEFIQQNKGLATEA 346
+GI +ISTGKL+SLSEQELVDC DT+G DQGCEGGLM+DAF+FI QN G++TEA
Sbjct: 159 EGIHKISTGKLVSLSEQELVDC-DTNGVDQGCEGGLMDDAFKFIIQNNGISTEA 211
Score = 77.4 bits (189), Expect(4) = 6e-40
Identities = 36/51 (70%), Positives = 40/51 (78%), Gaps = 4/51 (7%)
Frame = -1
Query: 189 ANQASGSAFQFYSSG----DCGIDLDHGVTAVGFGATSDGTKYWLVKNSWG 49
A ASGS FQFY SG CG +LDHGVTAVG+G ++DGTKYWLVKNSWG
Sbjct: 260 AIDASGSDFQFYKSGVFTGSCGTELDHGVTAVGYGISNDGTKYWLVKNSWG 310
Score = 35.8 bits (81), Expect(4) = 6e-40
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 544 GCCWAFYAVAATEGYH 497
GCCWAF A+AATEG H
Sbjct: 147 GCCWAFSAIAATEGIH 162
Score = 32.7 bits (73), Expect(4) = 6e-40
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3
Query: 247 AQINGYEDVPVNNENAL 197
A I GYEDVP NNENAL
Sbjct: 232 ATITGYEDVPANNENAL 248
>ref|XP_003607574.1| Cysteine protease [Medicago truncatula] gi|355508629|gb|AES89771.1|
Cysteine protease [Medicago truncatula]
Length = 345
Score = 82.4 bits (202), Expect(4) = 3e-39
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = -1
Query: 507 KGITQISTGKLISLSEQELVDCADTSGQDQGCEGGLMEDAFEFIQQNKGLATEA 346
+GI ++STGKL+SLSEQELVDC DT G DQGCEGGLM+DAF+FI QN GL TEA
Sbjct: 161 EGIHKLSTGKLVSLSEQELVDC-DTKGVDQGCEGGLMDDAFKFIIQNHGLHTEA 213
Score = 77.4 bits (189), Expect(4) = 3e-39
Identities = 37/55 (67%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Frame = -1
Query: 189 ANQASGSAFQFYSSG----DCGIDLDHGVTAVGFGATSDGTKYWLVKNSWGHWMG 37
A ASGS FQFY SG CG LDHGVTAVG+G ++DGTKYWLVKNSWG+ G
Sbjct: 262 AIDASGSDFQFYKSGVFTGSCGTQLDHGVTAVGYGISNDGTKYWLVKNSWGNDWG 316
Score = 36.2 bits (82), Expect(4) = 3e-39
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -3
Query: 544 GCCWAFYAVAATEGYH 497
GCCWAF AVAATEG H
Sbjct: 149 GCCWAFSAVAATEGIH 164
Score = 32.0 bits (71), Expect(4) = 3e-39
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -3
Query: 247 AQINGYEDVPVNNENAL 197
A I GYEDVP NNENAL
Sbjct: 234 ATIAGYEDVPANNENAL 250
>ref|XP_002316833.1| predicted protein [Populus trichocarpa] gi|222859898|gb|EEE97445.1|
predicted protein [Populus trichocarpa]
Length = 305
Score = 147 bits (371), Expect(2) = 2e-37
Identities = 85/157 (54%), Positives = 93/157 (59%), Gaps = 4/157 (2%)
Frame = -1
Query: 507 KGITQISTGKLISLSEQELVDCADTSGQDQGCEGGLMEDAFEFIQQNKGLATEAXXXXXX 328
+GITQ+STGKLISLSEQELVDC DTSG+DQGC GGLM+DAF+FI QNKGL TEA
Sbjct: 124 EGITQLSTGKLISLSEQELVDC-DTSGEDQGCNGGLMDDAFDFIIQNKGLTTEANYPYQG 182
Query: 327 XXXXXXXXXXXXXXXXXXXXXXXXXXXLR*MVMKMFQ*TTRTHYYRANQASGSAFQFYSS 148
L + A A GSAFQFYSS
Sbjct: 183 ADGACNSGKAAAKITGYEDVPANSEAAL-------LKAVANQPVSVAIDAGGSAFQFYSS 235
Query: 147 ----GDCGIDLDHGVTAVGFGATSDGTKYWLVKNSWG 49
GDCG DLDHGVTAVG+G + DGTKYWLVKNSWG
Sbjct: 236 GVFTGDCGTDLDHGVTAVGYGMSDDGTKYWLVKNSWG 272
Score = 33.5 bits (75), Expect(2) = 2e-37
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3
Query: 544 GCCWAFYAVAATEG 503
GCCWAF AVAATEG
Sbjct: 112 GCCWAFSAVAATEG 125
>dbj|BAF56428.1| cysteine proteinase [Lotus japonicus]
Length = 342
Score = 140 bits (354), Expect(2) = 2e-35
Identities = 82/161 (50%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Frame = -1
Query: 507 KGITQISTGKLISLSEQELVDCADTSGQDQGCEGGLMEDAFEFIQQNKGLATEAXXXXXX 328
+GIT++STGKLISLSEQELVDC DT G DQGCEGGLM+DAF+FI QNKGL TEA
Sbjct: 158 EGITKLSTGKLISLSEQELVDC-DTKGVDQGCEGGLMDDAFKFIMQNKGLNTEAKYPYQG 216
Query: 327 XXXXXXXXXXXXXXXXXXXXXXXXXXXLR*MVMKMFQ*TTRTHYYRANQASGSAFQFYSS 148
+ + A ASGS FQFYSS
Sbjct: 217 VDATCNANAEAKDAASIKGFEDVPAN----SESALLKAVANQPISVAIDASGSEFQFYSS 272
Query: 147 ----GDCGIDLDHGVTAVGFGATSDGTKYWLVKNSWGHWMG 37
G CG +LDHGVTAVG+G + DGTKYWLVKNSWG G
Sbjct: 273 GLFTGSCGTELDHGVTAVGYGVSDDGTKYWLVKNSWGEQWG 313
Score = 33.5 bits (75), Expect(2) = 2e-35
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3
Query: 544 GCCWAFYAVAATEG 503
GCCWAF AVAATEG
Sbjct: 146 GCCWAFSAVAATEG 159