BLASTX nr result

ID: Coptis23_contig00034274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034274
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279988.1| PREDICTED: uncharacterized protein LOC100268...   132   2e-29
emb|CAN62485.1| hypothetical protein VITISV_010813 [Vitis vinifera]   132   2e-29
emb|CBI15660.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002322248.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002318723.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_002279988.1| PREDICTED: uncharacterized protein LOC100268151 [Vitis vinifera]
          Length = 657

 Score =  132 bits (333), Expect = 2e-29
 Identities = 75/123 (60%), Positives = 84/123 (68%)
 Frame = -2

Query: 369 LHNREGDDAVTLHLDNISPMGRRXXXXXXXXXXXXXXXXXXXEDRAMRYIFLMNNILYIV 190
           L NR+GD+   L L N  P+GRR                   ED AM+YIFLMNNILYIV
Sbjct: 446 LQNRDGDN---LQLGNTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIV 502

Query: 189 QKVKNSELGKLLGDQWVRKRCSQIRQYSTCYLRASWSKVLSYLKDEGIAGSGSFSNISKV 10
           QKVK+SELGK+LGD WVRKR  QIRQY+T YLRASWSKVL+ LKDEGI GS   SN SK+
Sbjct: 503 QKVKDSELGKILGDHWVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGSS--SNASKM 560

Query: 9   ILK 1
            LK
Sbjct: 561 ALK 563


>emb|CAN62485.1| hypothetical protein VITISV_010813 [Vitis vinifera]
          Length = 657

 Score =  132 bits (333), Expect = 2e-29
 Identities = 75/123 (60%), Positives = 84/123 (68%)
 Frame = -2

Query: 369 LHNREGDDAVTLHLDNISPMGRRXXXXXXXXXXXXXXXXXXXEDRAMRYIFLMNNILYIV 190
           L NR+GD+   L L N  P+GRR                   ED AM+YIFLMNNILYIV
Sbjct: 446 LQNRDGDN---LQLGNTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIV 502

Query: 189 QKVKNSELGKLLGDQWVRKRCSQIRQYSTCYLRASWSKVLSYLKDEGIAGSGSFSNISKV 10
           QKVK+SELGK+LGD WVRKR  QIRQY+T YLRASWSKVL+ LKDEGI GS   SN SK+
Sbjct: 503 QKVKDSELGKILGDHWVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGSS--SNASKM 560

Query: 9   ILK 1
            LK
Sbjct: 561 ALK 563


>emb|CBI15660.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/108 (62%), Positives = 75/108 (69%)
 Frame = -2

Query: 324 NISPMGRRXXXXXXXXXXXXXXXXXXXEDRAMRYIFLMNNILYIVQKVKNSELGKLLGDQ 145
           N  P+GRR                   ED AM+YIFLMNNILYIVQKVK+SELGK+LGD 
Sbjct: 262 NTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIVQKVKDSELGKILGDH 321

Query: 144 WVRKRCSQIRQYSTCYLRASWSKVLSYLKDEGIAGSGSFSNISKVILK 1
           WVRKR  QIRQY+T YLRASWSKVL+ LKDEGI GS   SN SK+ LK
Sbjct: 322 WVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGSS--SNASKMALK 367


>ref|XP_002322248.1| predicted protein [Populus trichocarpa] gi|222869244|gb|EEF06375.1|
           predicted protein [Populus trichocarpa]
          Length = 656

 Score =  123 bits (308), Expect = 2e-26
 Identities = 68/125 (54%), Positives = 83/125 (66%)
 Frame = -2

Query: 375 NRLHNREGDDAVTLHLDNISPMGRRXXXXXXXXXXXXXXXXXXXEDRAMRYIFLMNNILY 196
           + L+  + DD   L L++++P+ RR                   ED AM+YIFLMNNILY
Sbjct: 440 DELNGLQNDDGERLQLESMAPITRRLLALLSTLESNLEEKSRLYEDGAMQYIFLMNNILY 499

Query: 195 IVQKVKNSELGKLLGDQWVRKRCSQIRQYSTCYLRASWSKVLSYLKDEGIAGSGSFSNIS 16
           +VQKVK+SEL K+LGDQWVRK   QIRQY+T YLRA+WSK LS LKDEGI GS   +N S
Sbjct: 500 MVQKVKDSELIKILGDQWVRKHRGQIRQYATAYLRAAWSKALSCLKDEGIGGSS--NNAS 557

Query: 15  KVILK 1
           KV LK
Sbjct: 558 KVALK 562


>ref|XP_002318723.1| predicted protein [Populus trichocarpa] gi|222859396|gb|EEE96943.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score =  122 bits (305), Expect = 4e-26
 Identities = 67/125 (53%), Positives = 82/125 (65%)
 Frame = -2

Query: 375 NRLHNREGDDAVTLHLDNISPMGRRXXXXXXXXXXXXXXXXXXXEDRAMRYIFLMNNILY 196
           + L+  + DD   L L+++SP+ RR                   ED AM+YIF MNNILY
Sbjct: 444 DELNGLQNDDGERLQLESLSPIARRLLALLSTLESNLEEKSTLYEDGAMQYIFRMNNILY 503

Query: 195 IVQKVKNSELGKLLGDQWVRKRCSQIRQYSTCYLRASWSKVLSYLKDEGIAGSGSFSNIS 16
           +VQKVK+SEL K+LGDQWVRK   QIRQY+T YLRA+W+K LS LKDEGI GS   +N S
Sbjct: 504 MVQKVKDSELIKILGDQWVRKHRGQIRQYATAYLRAAWTKALSCLKDEGIGGSS--NNAS 561

Query: 15  KVILK 1
           KV LK
Sbjct: 562 KVALK 566


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