BLASTX nr result

ID: Coptis23_contig00034272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034272
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27298.3| unnamed protein product [Vitis vinifera]              332   8e-89
ref|XP_002316084.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
ref|XP_003607813.1| Asparagine synthetase domain-containing prot...   301   2e-79
ref|XP_003556625.1| PREDICTED: asparagine synthetase domain-cont...   296   5e-78
ref|XP_002512068.1| asparagine synthetase, putative [Ricinus com...   289   7e-76

>emb|CBI27298.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  332 bits (852), Expect = 8e-89
 Identities = 179/389 (46%), Positives = 228/389 (58%), Gaps = 22/389 (5%)
 Frame = -2

Query: 1102 RGPDNLGTRKVY--PQKNDDSVAEL-----------------YFVGATLQLTGITPVFQP 980
            RGPD+LG +K++  P  + +   EL                 +F+GATLQL G+ P+ QP
Sbjct: 42   RGPDSLGCKKIFLHPTVSGEECVELRYCGDKCDCTFFANGELHFIGATLQLRGVNPITQP 101

Query: 979  LVDTCSNVLVYNGEIFGGLHISKDGNDSETLMHSLGKCCPCNCHGHIIECQCIEDGQISV 800
            LVD   N+LVYNGEIFGG+H+  D ND+E LM SLGKCC C   GH   C     G+ S+
Sbjct: 102  LVDESGNILVYNGEIFGGIHVGSDSNDAEILMQSLGKCCTCGSPGHTTACNYSGLGKSSI 161

Query: 799  IELLSTIKGPWALIYWQDSSKTLWFGRDAFGRRSLLVHWPTWDDPRFLLSSVSPPLPVKD 620
             ELLSTIKGPWA+IYWQDSS+T+WFGRDAFGRRSLLVHWP  +D RFLLSSVSP   V+ 
Sbjct: 162  PELLSTIKGPWAIIYWQDSSRTMWFGRDAFGRRSLLVHWPNLEDCRFLLSSVSPISSVEQ 221

Query: 619  NSG---EGQMKDLGFWEELLCGIYSVKLNETNLTGCLVGEVRKHDWADPVLNELINWERT 449
            +S    E ++ ++ FW+EL CG+YSV +  +    CL+GEV+KH+W +P+L EL+ WERT
Sbjct: 222  SSDFEVENRITNINFWDELSCGVYSVSIGSSKADKCLLGEVKKHEWTNPILKELVKWERT 281

Query: 448  YVERKAHEIYPHSVTVKKGHHILNPCNTNGISTKSSCTAEDGKLCAEVPASLVNGNNVHL 269
            YVE K  E+           H + P     + +          +C E   S +      +
Sbjct: 282  YVEPKPAEL-----------HFMIPSKQPDVHS----------ICLERKPSGLGPMQTSV 320

Query: 268  PVSLPAHNXXXXXXXXXXXXAIINPIYQATVCKTIQDKPVPVAILFSGGLDSMIXXXXXX 89
            PV  PA                 + I+ A  C   Q++ VPVAILFSGGLDSMI      
Sbjct: 321  PV--PAQTVLIALRESMMRRTTQSAIFPAVTCDLQQEELVPVAILFSGGLDSMILAALLD 378

Query: 88   XXXXXCYEVDLLNVSFDEQHAPDRISARA 2
                  Y +DLLNVSFD Q APDRISA+A
Sbjct: 379  ECLQPSYGIDLLNVSFDGQSAPDRISAKA 407


>ref|XP_002316084.1| predicted protein [Populus trichocarpa] gi|222865124|gb|EEF02255.1|
            predicted protein [Populus trichocarpa]
          Length = 780

 Score =  301 bits (771), Expect = 2e-79
 Identities = 163/352 (46%), Positives = 214/352 (60%), Gaps = 3/352 (0%)
 Frame = -2

Query: 1048 SVAELYFVGATLQLTGITPVFQPLVDTCSNVLVYNGEIFGGLHISKDGNDSETLMHSLGK 869
            SV EL F+GATLQL G+ P+ QP VD+  N   + GEIFGG+H+  D ND E LM +LG 
Sbjct: 104  SVGELQFIGATLQLRGLNPIIQPFVDSYGNCCKFEGEIFGGIHVESDRNDGEVLMQTLGN 163

Query: 868  CCPCNCHGHIIECQCIEDGQISVIELLSTIKGPWALIYWQDSSKTLWFGRDAFGRRSLLV 689
            CC C  +GH   C     G  SV  + STIKGPWA+IYWQ+SS+TLWFGRDAFGRRSL+V
Sbjct: 164  CCSCGSNGHTGPCSAAGHGCSSVPNVFSTIKGPWAIIYWQESSRTLWFGRDAFGRRSLVV 223

Query: 688  HWPTWDDPRFLLSSVSPPLPVKDNSGEGQMKD---LGFWEELLCGIYSVKLNETNLTGCL 518
            HWPT  D RFL+SSVSP   V D S + ++++     FWEEL CGIYS+ ++ + L G L
Sbjct: 224  HWPTVKDSRFLISSVSPFSSV-DQSSDFEVENGTHHNFWEELSCGIYSLSMDASKLDGYL 282

Query: 517  VGEVRKHDWADPVLNELINWERTYVERKAHEIYPHSVTVKKGHHILNPCNTNGISTKSSC 338
            VGEV+ H+W + +L ELI WER     K +E++       +G H + P +++ ++ +S  
Sbjct: 283  VGEVKNHEWGNAMLLELIKWERVSFNPKPNELHGSLNGTLEGQHHMYPASSDIMTFES-- 340

Query: 337  TAEDGKLCAEVPASLVNGNNVHLPVSLPAHNXXXXXXXXXXXXAIINPIYQATVCKTIQD 158
                             G N  + +SLPAHN            A  + I++A  C + ++
Sbjct: 341  -----------------GPNQTM-ISLPAHNVLSALRKSVMLRASQHRIFEAGRCYSRRE 382

Query: 157  KPVPVAILFSGGLDSMIXXXXXXXXXXXCYEVDLLNVSFDEQHAPDRISARA 2
            + VPVA+LFSGGLDSMI            Y +DLLNVSFD Q APDRISA+A
Sbjct: 383  EHVPVAVLFSGGLDSMILSALLDECLDPSYGIDLLNVSFDGQSAPDRISAKA 434


>ref|XP_003607813.1| Asparagine synthetase domain-containing protein [Medicago truncatula]
            gi|355508868|gb|AES90010.1| Asparagine synthetase
            domain-containing protein [Medicago truncatula]
          Length = 646

 Score =  301 bits (770), Expect = 2e-79
 Identities = 167/388 (43%), Positives = 218/388 (56%), Gaps = 22/388 (5%)
 Frame = -2

Query: 1102 RGPDNLGTRKVYPQKND-------------------DSVAELYFVGATLQLTGITPVFQP 980
            RGPD+LG +KV  Q N+                   DS  EL+F+GATLQL G  P+ QP
Sbjct: 46   RGPDSLGVKKVTLQHNEKQISSFIEHDETLLCSANEDSNGELHFIGATLQLRGTVPLVQP 105

Query: 979  LVDTCSNVLVYNGEIFGGLHISKDGNDSETLMHSLGKCCPCNCHGHIIECQCIEDGQISV 800
            LVD   N+LVYNGEIFGGL ++ D ND+E LM +LG CC C   G  +   C++ G+ S+
Sbjct: 106  LVDASRNILVYNGEIFGGLQLASDCNDAEFLMQTLGNCCSC---GSCLTGNCVKCGKGSI 162

Query: 799  IELLSTIKGPWALIYWQDSSKTLWFGRDAFGRRSLLVHWPTWDDPRFLLSSVSPPLP--- 629
             ++LSTIKGPWA+IYWQDSS+TLWFGRDAFGRRSLLVHWPT DD  FLLSSVSP  P   
Sbjct: 163  TDVLSTIKGPWAIIYWQDSSRTLWFGRDAFGRRSLLVHWPTEDDSTFLLSSVSPVAPDQQ 222

Query: 628  VKDNSGEGQMKDLGFWEELLCGIYSVKLNETNLTGCLVGEVRKHDWADPVLNELINWERT 449
              +N     +++  +WEEL CG+YS+ ++ +N  G LVGEV+ H++ +  L ELI WER 
Sbjct: 223  ATENEAHNGIENRSYWEELPCGVYSMHVDASNSNGFLVGEVQIHEYTNSTLKELIKWERI 282

Query: 448  YVERKAHEIYPHSVTVKKGHHILNPCNTNGISTKSSCTAEDGKLCAEVPASLVNGNNVHL 269
             V   +  +        +G   ++  +   +  ++  T                      
Sbjct: 283  SVVPSSENLQTFCPKFSRGQQDVHSASLETVPCEAGSTQNS------------------- 323

Query: 268  PVSLPAHNXXXXXXXXXXXXAIINPIYQATVCKTIQDKPVPVAILFSGGLDSMIXXXXXX 89
             + + AH               +  IYQA +    Q+K VPVAILFSGGLDSMI      
Sbjct: 324  -IPMRAHMLLNVLKESVIRRTSLYTIYQAVISGIKQEKFVPVAILFSGGLDSMILAALLD 382

Query: 88   XXXXXCYEVDLLNVSFDEQHAPDRISAR 5
                  YE+DLL VSFD + APDR SA+
Sbjct: 383  QCLDPTYEIDLLTVSFDGELAPDRKSAK 410


>ref|XP_003556625.1| PREDICTED: asparagine synthetase domain-containing protein 1-like
            [Glycine max]
          Length = 629

 Score =  296 bits (759), Expect = 5e-78
 Identities = 174/392 (44%), Positives = 224/392 (57%), Gaps = 25/392 (6%)
 Frame = -2

Query: 1102 RGPDNLGTRKVYPQ-------------KNDDSV------AELYFVGATLQLTGITPVFQP 980
            RGPD+ G +KV  Q             ++ D+       A+L+F GATLQL GI P+ QP
Sbjct: 48   RGPDSFGAKKVLLQLLGQNGVSSFTVEEDGDAADGAIETAKLHFFGATLQLRGINPLVQP 107

Query: 979  LVDTCSNVLVYNGEIFGGLHISKDGNDSETLMHSLGKCCPCNCHGHIIECQCIEDGQISV 800
            L D   NVLVYNGEIFGGLH++ D ND+E L+ ++G+CC C   G     +C+E G+ S+
Sbjct: 108  LTDASGNVLVYNGEIFGGLHLASDCNDAEFLLQTVGECCSC---GSCATDRCVECGKSSI 164

Query: 799  IELLSTIKGPWALIYWQDSSKTLWFGRDAFGRRSLLVHWPTWDDPRFLLSSVSPPLPV-- 626
              +LS IKGPWA+IYWQDSS+TLWFGRDAFGRRSLLVHWPT DD  FLLSSVSP  PV  
Sbjct: 165  AGVLSAIKGPWAIIYWQDSSRTLWFGRDAFGRRSLLVHWPTVDDSTFLLSSVSPVSPVQQ 224

Query: 625  ----KDNSGEGQMKDLGFWEELLCGIYSVKLNETNLTGCLVGEVRKHDWADPVLNELINW 458
                +D++G G    L +WEEL CGIYSV ++ +  +G LVGEV+ H++ + +LNELI W
Sbjct: 225  ASEYEDHNGIG---CLSYWEELPCGIYSVHVDASKTSGYLVGEVKIHEYTNSMLNELIKW 281

Query: 457  ERTYVERKAHEIYPHSVTVKKGHHILNPCNTNGISTKSSCTAEDGKLCAEVPASLVNGNN 278
            ER  VE  + +++  S +++                               PA       
Sbjct: 282  ERISVEPSSEDLHTFSGSIQ-------------------------------PA------- 303

Query: 277  VHLPVSLPAHNXXXXXXXXXXXXAIINPIYQATVCKTIQDKPVPVAILFSGGLDSMIXXX 98
                + +PAH               +  +YQA +    Q+K  PVAILFSGGLDSMI   
Sbjct: 304  ----IPMPAHILLNALKESVLRRTSMYTVYQAVISGIRQEKFFPVAILFSGGLDSMILAA 359

Query: 97   XXXXXXXXCYEVDLLNVSFDEQHAPDRISARA 2
                     YE+DLLNVSFD Q APDR SA+A
Sbjct: 360  LLDKCMDPSYEIDLLNVSFDGQLAPDRKSAKA 391


>ref|XP_002512068.1| asparagine synthetase, putative [Ricinus communis]
            gi|223549248|gb|EEF50737.1| asparagine synthetase,
            putative [Ricinus communis]
          Length = 589

 Score =  289 bits (740), Expect = 7e-76
 Identities = 172/388 (44%), Positives = 220/388 (56%), Gaps = 21/388 (5%)
 Frame = -2

Query: 1102 RGPDNLGTRK------------VYPQKNDDSVAE---LYFVGATLQLTGITPVFQPLVDT 968
            RGPD+LG++K            V  +++ +S  E   L+FVGATLQL G+ PV QP +D+
Sbjct: 44   RGPDSLGSKKLIISAKDQELFSVIKEEDHNSANEEPCLHFVGATLQLRGLYPVTQPFLDS 103

Query: 967  CSNVLVYNGEIFGGLHISKDGNDSETLMHSLGKCCPCNCHGHIIECQCIEDGQISVIELL 788
              N+L+YNGEIFGG+H+  D ND E LM +LG CC C+   HI       D   SV+++L
Sbjct: 104  SKNILIYNGEIFGGIHVGSDSNDGEMLMRTLGSCCSCSSCEHIC-FSSRNDKNYSVLDVL 162

Query: 787  STIKGPWALIYWQDSSKTLWFGRDAFGRRSLLVHWPTWDDPRFLLSSVSPPLPVKDNSGE 608
            S IKGPWA+IYWQDSSKTLWFGRDA GRRSLLVHWPT   PRFLLSSVS P    D S +
Sbjct: 163  SAIKGPWAVIYWQDSSKTLWFGRDALGRRSLLVHWPTVKVPRFLLSSVS-PFSYVDGSYD 221

Query: 607  GQMKDL---GFWEELLCGIYSVKLNETNLTGCLVGEVRKHDWADPVLNELINWERTYVER 437
             ++++     FWEEL CG+YS+ +  + + GCL GEV+KH+WA   L ELI WER  VE 
Sbjct: 222  LEVEESTKPNFWEELPCGVYSLSVATSTVNGCLAGEVKKHEWASSTLTELIKWERVSVEP 281

Query: 436  KAHEIYPHSVTVKKGHHILNPCNTNGISTKSSCTAEDGKLCAEVPASLVNG---NNVHLP 266
            K  ++                          SC  +   +   VPA  V G    +V L 
Sbjct: 282  KPQDL------------------------NFSCGPDQTSIL--VPAQNVLGALRKSVMLR 315

Query: 265  VSLPAHNXXXXXXXXXXXXAIINPIYQATVCKTIQDKPVPVAILFSGGLDSMIXXXXXXX 86
             SL A                   I+QA    + +++ VPVA+LFSGGLDSMI       
Sbjct: 316  TSLHA-------------------IFQAGTSDSGKEEQVPVAVLFSGGLDSMILAALLDE 356

Query: 85   XXXXCYEVDLLNVSFDEQHAPDRISARA 2
                 + +DLLNVSFD + APDRIS +A
Sbjct: 357  CLDPSFGIDLLNVSFDGEFAPDRISGQA 384


Top