BLASTX nr result

ID: Coptis23_contig00034249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034249
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284550.1| PREDICTED: metal transporter Nramp5-like [Vi...   244   2e-62
ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cu...   242   1e-61
ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2...   241   1e-61
ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v...   239   5e-61
gb|AAU00158.1| root-specific metal transporter [Malus baccata]        238   1e-60

>ref|XP_002284550.1| PREDICTED: metal transporter Nramp5-like [Vitis vinifera]
          Length = 544

 Score =  244 bits (624), Expect = 2e-62
 Identities = 124/219 (56%), Positives = 153/219 (69%), Gaps = 5/219 (2%)
 Frame = -1

Query: 901 QSSAITGTYAGQYIMQGFLNLKMKMWIRNLMTRCIAIAPXXXXXXXXXXXXXXXXXXXXS 722
           QSS ITGTYAGQYIMQGFLNLKMK W+RNLMTRCIAI P                    S
Sbjct: 325 QSSTITGTYAGQYIMQGFLNLKMKRWLRNLMTRCIAITPSLIVSIISGSAGAGRLIIIAS 384

Query: 721 MLLSFELPFALIPLLKFSSSKHKMGPHKNSKYIIAFSWILGLCLIGTNIYFLASAFIDWL 542
           M+LSFELPFALIPLLKFSSS  KMGPHKNS Y+I FSWILG  L+G NIY+LA+ F++WL
Sbjct: 385 MILSFELPFALIPLLKFSSSSTKMGPHKNSIYVIVFSWILGFGLMGINIYYLATGFVNWL 444

Query: 541 IHNKLPKVANVFIGIIVFPMMAVYVISVIYLAVRKDKVVTFVDTTKPDHFAQIQIEKGI- 365
           +HN LPKV NVFIGIIVFP+MAVYV++V+YL  RKD VVTF++  K +H A+  +EK + 
Sbjct: 445 LHNDLPKVGNVFIGIIVFPLMAVYVLAVLYLTFRKDTVVTFIEAEKDEHSARTHVEKKLE 504

Query: 364 ----NPADDTHISDDVPYREDLAEMTHQNK*DVALLH*P 260
               + +  TH+   +       E++H ++ D+  +H P
Sbjct: 505 AEKYDQSARTHVEKKLDNSNHTFELSHLHREDLIDIHLP 543


>ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus]
           gi|449499093|ref|XP_004160719.1| PREDICTED: metal
           transporter Nramp5-like [Cucumis sativus]
          Length = 549

 Score =  242 bits (617), Expect = 1e-61
 Identities = 123/200 (61%), Positives = 145/200 (72%)
 Frame = -1

Query: 901 QSSAITGTYAGQYIMQGFLNLKMKMWIRNLMTRCIAIAPXXXXXXXXXXXXXXXXXXXXS 722
           QSS+ITGTYAGQ+IMQGFL+LKMK W RNLMTR IAI P                    S
Sbjct: 346 QSSSITGTYAGQFIMQGFLDLKMKTWARNLMTRSIAITPSLIVSIIGGPQGAGRLIIIAS 405

Query: 721 MLLSFELPFALIPLLKFSSSKHKMGPHKNSKYIIAFSWILGLCLIGTNIYFLASAFIDWL 542
           M+LSFELPFALIPLLKFSSS  KMGPHKNS YII  SWILGL +IG NIY+L++AF+DWL
Sbjct: 406 MILSFELPFALIPLLKFSSSSTKMGPHKNSIYIIVISWILGLAIIGINIYYLSTAFVDWL 465

Query: 541 IHNKLPKVANVFIGIIVFPMMAVYVISVIYLAVRKDKVVTFVDTTKPDHFAQIQIEKGIN 362
           IHN LPKVANVFIGI VFP+MA Y+ +VIYL  RKD+VVT+++  K D  AQ  +E G+N
Sbjct: 466 IHNNLPKVANVFIGIAVFPLMAAYIGAVIYLMFRKDRVVTYIEPEKDDAVAQAHLESGLN 525

Query: 361 PADDTHISDDVPYREDLAEM 302
            +        +P+REDLA +
Sbjct: 526 NSFGPRDVTPLPFREDLAHI 545


>ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1|
           nramp transporter [Populus trichocarpa]
          Length = 518

 Score =  241 bits (616), Expect = 1e-61
 Identities = 123/200 (61%), Positives = 144/200 (72%)
 Frame = -1

Query: 901 QSSAITGTYAGQYIMQGFLNLKMKMWIRNLMTRCIAIAPXXXXXXXXXXXXXXXXXXXXS 722
           QSS ITGTYAGQYIMQGFL LKM+ WIRNL+TRCIAIAP                    S
Sbjct: 315 QSSTITGTYAGQYIMQGFLELKMRKWIRNLVTRCIAIAPSLVVSIIGGSSGAGRLIIIAS 374

Query: 721 MLLSFELPFALIPLLKFSSSKHKMGPHKNSKYIIAFSWILGLCLIGTNIYFLASAFIDWL 542
           M+LSFELPFALIPLLKFSSS  KMGPHKNS YII  SWILGL +IG NIY+L++ F+ WL
Sbjct: 375 MILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGLGIIGVNIYYLSTGFVGWL 434

Query: 541 IHNKLPKVANVFIGIIVFPMMAVYVISVIYLAVRKDKVVTFVDTTKPDHFAQIQIEKGIN 362
           I N LPKV NVFIGIIVFP+MA+Y+++VIYL  RKD VVTF+   K D   Q  +E G+ 
Sbjct: 435 IDNNLPKVGNVFIGIIVFPLMAIYILAVIYLTFRKDSVVTFLGPNKNDPQQQANMENGLT 494

Query: 361 PADDTHISDDVPYREDLAEM 302
            + +    + VPYREDLA++
Sbjct: 495 KSTEGPEMERVPYREDLADI 514


>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
           gi|302141782|emb|CBI18985.3| unnamed protein product
           [Vitis vinifera]
          Length = 542

 Score =  239 bits (611), Expect = 5e-61
 Identities = 120/200 (60%), Positives = 143/200 (71%)
 Frame = -1

Query: 901 QSSAITGTYAGQYIMQGFLNLKMKMWIRNLMTRCIAIAPXXXXXXXXXXXXXXXXXXXXS 722
           QSS ITGTYAGQ+IMQGFL++KM+ W+RNLMTR IAI P                    S
Sbjct: 339 QSSTITGTYAGQFIMQGFLDIKMRKWLRNLMTRSIAITPSLIVSIIGGSAGAGRLIIIAS 398

Query: 721 MLLSFELPFALIPLLKFSSSKHKMGPHKNSKYIIAFSWILGLCLIGTNIYFLASAFIDWL 542
           M+LSFELPFALIPLLKFSSS  KMGPHKNS YII  SWILG  +IG NIY+L+++F+ WL
Sbjct: 399 MILSFELPFALIPLLKFSSSNTKMGPHKNSIYIIVISWILGFGIIGINIYYLSTSFVGWL 458

Query: 541 IHNKLPKVANVFIGIIVFPMMAVYVISVIYLAVRKDKVVTFVDTTKPDHFAQIQIEKGIN 362
           +HN LPKV NVFIGIIVFP+MA+Y++SVIYL  RKD VVTF++  K D   Q  +E G +
Sbjct: 459 LHNNLPKVGNVFIGIIVFPLMAIYILSVIYLTTRKDTVVTFIEPEKNDPNVQNHMENGFD 518

Query: 361 PADDTHISDDVPYREDLAEM 302
             D       VPYREDLA++
Sbjct: 519 QTDGVFELGHVPYREDLADI 538


>gb|AAU00158.1| root-specific metal transporter [Malus baccata]
          Length = 551

 Score =  238 bits (607), Expect = 1e-60
 Identities = 118/201 (58%), Positives = 148/201 (73%)
 Frame = -1

Query: 901 QSSAITGTYAGQYIMQGFLNLKMKMWIRNLMTRCIAIAPXXXXXXXXXXXXXXXXXXXXS 722
           QSS ITGTYAGQ++MQGFL++KMK W RNLMTRCIAI P                    S
Sbjct: 352 QSSTITGTYAGQFVMQGFLDIKMKKWARNLMTRCIAITPSLIVSIIGGSSGAGRLIIIAS 411

Query: 721 MLLSFELPFALIPLLKFSSSKHKMGPHKNSKYIIAFSWILGLCLIGTNIYFLASAFIDWL 542
           M+LSFELPFALIPLLKFS S  KMGPHKNS YII  SWI+G+ +IG NIY+L++ F+ W+
Sbjct: 412 MILSFELPFALIPLLKFSGSATKMGPHKNSIYIIVISWIIGMAIIGINIYYLSTGFVGWI 471

Query: 541 IHNKLPKVANVFIGIIVFPMMAVYVISVIYLAVRKDKVVTFVDTTKPDHFAQIQIEKGIN 362
           IH+ LPKVA VFIGI+VFP+MA+Y+++V+YLA+RKD VVTFV+ TK D  AQ Q+E G+ 
Sbjct: 472 IHSSLPKVATVFIGILVFPIMAIYILAVLYLALRKDSVVTFVEPTKNDPAAQNQMENGL- 530

Query: 361 PADDTHISDDVPYREDLAEMT 299
                +    VP+REDLA+++
Sbjct: 531 ---PNYGEPPVPFREDLADVS 548


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