BLASTX nr result

ID: Coptis23_contig00034240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034240
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFL46171.1| jasmonate ZIM domain protein f [Nicotiana attenuata]   116   6e-24
gb|AFL46174.1| jasmonate ZIM domain protein j [Nicotiana attenuata]   114   2e-23
ref|XP_002277769.1| PREDICTED: protein TIFY 5A [Vitis vinifera] ...   114   2e-23
emb|CBI30922.3| unnamed protein product [Vitis vinifera]              112   1e-22
ref|XP_002271197.1| PREDICTED: protein TIFY 5A-like [Vitis vinif...   110   3e-22

>gb|AFL46171.1| jasmonate ZIM domain protein f [Nicotiana attenuata]
          Length = 123

 Score =  116 bits (290), Expect = 6e-24
 Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
 Frame = -2

Query: 636 MRRNCNLDLCLVPPAAALS-----TSGGDAGRDSMNKETREKQHQQLTIFYNGRINVLDV 472
           MRRNCNL+L LVPP  ++S     T+   + RD  N+ T EKQ QQLTIFYNG++ V D 
Sbjct: 1   MRRNCNLELRLVPPCVSVSPKDCTTTPYFSMRD--NQGTEEKQQQQLTIFYNGKVVVSDA 58

Query: 471 TEFQARAIIYHARRETDEKLKSPHDSHSEPASPYLQSQLHSPNGVLMKKSLQSFLQKRKN 292
           TE QA+AIIY A RET+E  K+     SE +SP LQ+Q     G+ MKKSLQ FLQKRKN
Sbjct: 59  TELQAKAIIYLASRETEENTKT-SSPISESSSPLLQTQ----TGLSMKKSLQRFLQKRKN 113

Query: 291 RIKSTNSPY 265
           RI+ T SPY
Sbjct: 114 RIQET-SPY 121


>gb|AFL46174.1| jasmonate ZIM domain protein j [Nicotiana attenuata]
          Length = 132

 Score =  114 bits (285), Expect = 2e-23
 Identities = 71/136 (52%), Positives = 90/136 (66%), Gaps = 10/136 (7%)
 Frame = -2

Query: 636 MRRNCNLDLCLVPPAAALSTSGGDAGRDSMNKE----TREKQHQQLTIFYNGRINVLDVT 469
           MR+NCNL+L L+PP+ + S         SMN+E    T EK+ QQLTIFYNG++ V D T
Sbjct: 1   MRKNCNLELRLMPPSFSFSPKSCTTPYFSMNREDKENTEEKEPQQLTIFYNGKLVVSDAT 60

Query: 468 EFQARAIIYHARRETDEKLK--SPHDSH----SEPASPYLQSQLHSPNGVLMKKSLQSFL 307
           E QA+AIIY A RE ++K+K  SP        SEP+SP LQS     + + MK+SLQ FL
Sbjct: 61  ELQAKAIIYLASREMEKKIKIRSPISESSSPISEPSSPLLQS---PASDISMKRSLQRFL 117

Query: 306 QKRKNRIKSTNSPYQR 259
           QKRKNRI++T SPY R
Sbjct: 118 QKRKNRIQAT-SPYHR 132


>ref|XP_002277769.1| PREDICTED: protein TIFY 5A [Vitis vinifera]
           gi|147805843|emb|CAN62787.1| hypothetical protein
           VITISV_033493 [Vitis vinifera]
           gi|297740737|emb|CBI30919.3| unnamed protein product
           [Vitis vinifera]
          Length = 127

 Score =  114 bits (285), Expect = 2e-23
 Identities = 69/131 (52%), Positives = 88/131 (67%), Gaps = 6/131 (4%)
 Frame = -2

Query: 633 RRNCNLDLCLVPPAAALSTSGG------DAGRDSMNKETREKQHQQLTIFYNGRINVLDV 472
           RRNCNL+L L+PP    S+         + GR S  ++   +Q QQLTIFYNGRI V DV
Sbjct: 3   RRNCNLELRLLPPNTDYSSPQHHHNMMMETGRGSPQEQ---QQQQQLTIFYNGRICVCDV 59

Query: 471 TEFQARAIIYHARRETDEKLKSPHDSHSEPASPYLQSQLHSPNGVLMKKSLQSFLQKRKN 292
           TE QARAI+  A RE +EK ++P  + S+  SP L SQL+S  G+ MK+SLQ FLQKRKN
Sbjct: 60  TELQARAILLLASREMEEKTRTP--TASDATSPSLHSQLYSATGLSMKRSLQRFLQKRKN 117

Query: 291 RIKSTNSPYQR 259
           R+++T SPY R
Sbjct: 118 RMEAT-SPYHR 127


>emb|CBI30922.3| unnamed protein product [Vitis vinifera]
          Length = 130

 Score =  112 bits (279), Expect = 1e-22
 Identities = 70/134 (52%), Positives = 88/134 (65%), Gaps = 1/134 (0%)
 Frame = -2

Query: 663 MKETSVPLAMR-RNCNLDLCLVPPAAALSTSGGDAGRDSMNKETREKQHQQLTIFYNGRI 487
           MK     L M+ RNCNL+L L+P  A       + GR S  ++   +Q QQLTIFY+GR+
Sbjct: 1   MKRNHFSLYMKSRNCNLELSLLPSTAYRHKMMMEMGRGSPQEQ---QQQQQLTIFYDGRV 57

Query: 486 NVLDVTEFQARAIIYHARRETDEKLKSPHDSHSEPASPYLQSQLHSPNGVLMKKSLQSFL 307
            V +VTE QARAII  A RE + K  +P  S     SP LQSQL+SP G+ MK+SL+SFL
Sbjct: 58  CVCEVTELQARAIILTASREVETK--TPTASDVTMVSPSLQSQLYSPTGLSMKRSLRSFL 115

Query: 306 QKRKNRIKSTNSPY 265
           QKRKNRI++T SPY
Sbjct: 116 QKRKNRIEAT-SPY 128


>ref|XP_002271197.1| PREDICTED: protein TIFY 5A-like [Vitis vinifera]
          Length = 121

 Score =  110 bits (275), Expect = 3e-22
 Identities = 66/122 (54%), Positives = 83/122 (68%)
 Frame = -2

Query: 630 RNCNLDLCLVPPAAALSTSGGDAGRDSMNKETREKQHQQLTIFYNGRINVLDVTEFQARA 451
           RNCNL+L L+P  A       + GR S  ++   +Q QQLTIFY+GR+ V +VTE QARA
Sbjct: 4   RNCNLELSLLPSTAYRHKMMMEMGRGSPQEQ---QQQQQLTIFYDGRVCVCEVTELQARA 60

Query: 450 IIYHARRETDEKLKSPHDSHSEPASPYLQSQLHSPNGVLMKKSLQSFLQKRKNRIKSTNS 271
           II  A RE + K  +P  S     SP LQSQL+SP G+ MK+SL+SFLQKRKNRI++T S
Sbjct: 61  IILTASREVETK--TPTASDVTMVSPSLQSQLYSPTGLSMKRSLRSFLQKRKNRIEAT-S 117

Query: 270 PY 265
           PY
Sbjct: 118 PY 119


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