BLASTX nr result

ID: Coptis23_contig00034214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034214
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI23413.1| pectin methylesterase [Coffea arabica]                 204   8e-51
ref|XP_003625727.1| Pectinesterase [Medicago truncatula] gi|3555...   202   3e-50
ref|NP_181209.1| putative pectinesterase 15 [Arabidopsis thalian...   199   3e-49
ref|NP_181208.1| putative pectinesterase 14 [Arabidopsis thalian...   198   3e-49
ref|XP_002881462.1| hypothetical protein ARALYDRAFT_902790 [Arab...   198   4e-49

>gb|AFI23413.1| pectin methylesterase [Coffea arabica]
          Length = 273

 Score =  204 bits (518), Expect = 8e-51
 Identities = 89/158 (56%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   NKGKHFFKECFIQGSVDFIYGNGRSLFEDCILNVVAQK-SQSVNAIITAHGRTSLKENTG 177
           ++G+H+FKECFIQGS+DFI+GNGRSL+EDC++N VA++ S  ++  ITA GR S  +N+G
Sbjct: 96  DRGRHYFKECFIQGSIDFIFGNGRSLYEDCVINSVAKEVSSGISGAITAQGRDSTSDNSG 155

Query: 178 FSFVNCKITGTGNAWLGRAWRPFATVVFINANMSGLVSKEGWNDFGNRSSEKTVFFGEYG 357
           FSFVNC + G+G  WLGRAW  +ATVVF    MS +VS +GWND+ + S ++TVFFGEYG
Sbjct: 156 FSFVNCNVEGSGKVWLGRAWGSYATVVFSKTYMSDVVSSDGWNDWRDPSRDQTVFFGEYG 215

Query: 358 CYGEGASHSERVKYSKQLTLDEATPFMNTSYIEGETWL 471
           C+G GA+++ RV Y KQL   EA  F++ +YI+G+ WL
Sbjct: 216 CFGPGANYTFRVSYGKQLKQSEAAAFLDVTYIDGQEWL 253


>ref|XP_003625727.1| Pectinesterase [Medicago truncatula] gi|355500742|gb|AES81945.1|
           Pectinesterase [Medicago truncatula]
          Length = 398

 Score =  202 bits (513), Expect = 3e-50
 Identities = 91/158 (57%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   NKGKHFFKECFIQGSVDFIYGNGRSLFEDCILNVVAQKS-QSVNAIITAHGRTSLKENTG 177
           + G+H+FKECFIQGS+DFI+GN RS +EDC +N +A++    +   ITAHGR SLKE TG
Sbjct: 236 DSGRHYFKECFIQGSIDFIFGNARSFYEDCTINCIAKQDLDGIGGSITAHGRQSLKEETG 295

Query: 178 FSFVNCKITGTGNAWLGRAWRPFATVVFINANMSGLVSKEGWNDFGNRSSEKTVFFGEYG 357
           FSFVNC I G+G  WLGRAW  FATVVF   NMS +V+ EGWND+ + S +++VFFGEY 
Sbjct: 296 FSFVNCNIVGSGKVWLGRAWGAFATVVFSTTNMSDVVAAEGWNDWRDPSRDRSVFFGEYH 355

Query: 358 CYGEGASHSERVKYSKQLTLDEATPFMNTSYIEGETWL 471
           C G GA+++ RV Y++QL   EAT ++N SYI+G  WL
Sbjct: 356 CIGLGANYTSRVSYARQLRDFEATSYINVSYIDGNDWL 393


>ref|NP_181209.1| putative pectinesterase 15 [Arabidopsis thaliana]
           gi|75315660|sp|Q9ZQA3.1|PME15_ARATH RecName:
           Full=Probable pectinesterase 15; Short=PE 15; AltName:
           Full=Pectin methylesterase 15; Short=AtPME15; Flags:
           Precursor gi|4415916|gb|AAD20147.1| putative
           pectinesterase [Arabidopsis thaliana]
           gi|330254195|gb|AEC09289.1| putative pectinesterase 15
           [Arabidopsis thaliana]
          Length = 407

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/158 (58%), Positives = 121/158 (76%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   NKGKHFFKECFIQGSVDFIYGNGRSLFEDCILNVVAQKSQS-VNAIITAHGRTSLKENTG 177
           +KG+HFFKECFIQGS+DFI+GNGRSL++DC +N +A+ + S V   ITA GR S  E +G
Sbjct: 228 DKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSG 287

Query: 178 FSFVNCKITGTGNAWLGRAWRPFATVVFINANMSGLVSKEGWNDFGNRSSEKTVFFGEYG 357
           FSFVNCKI G+G   LGRAW  +ATVVF N  MSG+++ EGWN++G+ + EKTV FGE+ 
Sbjct: 288 FSFVNCKIDGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHK 347

Query: 358 CYGEGASHSERVKYSKQLTLDEATPFMNTSYIEGETWL 471
           CYG GA + ERV + KQLT  EA+ F++ S+I+G+ WL
Sbjct: 348 CYGPGADYKERVLFGKQLTDSEASSFIDVSFIDGDEWL 385


>ref|NP_181208.1| putative pectinesterase 14 [Arabidopsis thaliana]
           gi|75315661|sp|Q9ZQA4.1|PME14_ARATH RecName:
           Full=Putative pectinesterase 14; Short=PE 14; AltName:
           Full=Pectin methylesterase 14; Short=AtPME14; Flags:
           Precursor gi|4415915|gb|AAD20146.1| putative
           pectinesterase [Arabidopsis thaliana]
           gi|330254194|gb|AEC09288.1| putative pectinesterase 14
           [Arabidopsis thaliana]
          Length = 333

 Score =  198 bits (504), Expect = 3e-49
 Identities = 88/156 (56%), Positives = 121/156 (77%)
 Frame = +1

Query: 4   KGKHFFKECFIQGSVDFIYGNGRSLFEDCILNVVAQKSQSVNAIITAHGRTSLKENTGFS 183
           +G+HFFK CFI+GS+DFI+GNGRSL+EDC L+ +A+  ++    ITA+G+ +LK+ TGF 
Sbjct: 180 EGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAK--ENTIGCITANGKDTLKDRTGFV 237

Query: 184 FVNCKITGTGNAWLGRAWRPFATVVFINANMSGLVSKEGWNDFGNRSSEKTVFFGEYGCY 363
           FVNCKITG+   WLGRAWRP+A V+F    MS +VS +GWND G+  +++TV++GE+ CY
Sbjct: 238 FVNCKITGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCY 297

Query: 364 GEGASHSERVKYSKQLTLDEATPFMNTSYIEGETWL 471
           G GA+HS+RV Y+K L+  EA PF N S+I+GE WL
Sbjct: 298 GPGANHSKRVTYAKLLSDVEAAPFTNISFIDGEEWL 333


>ref|XP_002881462.1| hypothetical protein ARALYDRAFT_902790 [Arabidopsis lyrata subsp.
           lyrata] gi|297327301|gb|EFH57721.1| hypothetical protein
           ARALYDRAFT_902790 [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/158 (55%), Positives = 120/158 (75%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   NKGKHFFKECFIQGSVDFIYGNGRSLFEDCILNVVAQKSQS-VNAIITAHGRTSLKENTG 177
           + G+H+FK+C IQGS+DFIYG GRSL+++C++  +A++S S ++ IITA GR S+ E +G
Sbjct: 190 SNGRHYFKQCVIQGSIDFIYGKGRSLYDECLIRSIAKESTSGISGIITAQGRESIDEKSG 249

Query: 178 FSFVNCKITGTGNAWLGRAWRPFATVVFINANMSGLVSKEGWNDFGNRSSEKTVFFGEYG 357
           FSF+ CKI GTG  WLGR WR +ATVVF    MS ++S EGWND+GN + +KTV FGE+ 
Sbjct: 250 FSFLKCKIEGTGKVWLGRPWRAYATVVFSQTYMSRIISPEGWNDWGNLTRDKTVTFGEHR 309

Query: 358 CYGEGASHSERVKYSKQLTLDEATPFMNTSYIEGETWL 471
           CYGEG+ +  RV Y+KQLT  EA+ F + SYI+G+ WL
Sbjct: 310 CYGEGSDYKGRVPYAKQLTDSEASSFTDISYIDGDQWL 347


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