BLASTX nr result

ID: Coptis23_contig00034201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034201
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY15214.1| TGA10 transcription factor [Nicotiana tabacum]         106   2e-21
ref|XP_003521195.1| PREDICTED: transcription factor HBP-1b(c1)-l...   105   4e-21
ref|XP_002275147.1| PREDICTED: transcription factor HBP-1b(c1)-l...   105   5e-21
ref|XP_003625220.1| Transcription factor, putative [Medicago tru...   103   1e-20
ref|XP_003625219.1| Transcription factor, putative [Medicago tru...   103   1e-20

>gb|AAY15214.1| TGA10 transcription factor [Nicotiana tabacum]
          Length = 506

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/78 (74%), Positives = 68/78 (87%), Gaps = 2/78 (2%)
 Frame = -2

Query: 253 ISFGMMQ-SSASIPGNFITSKDPSGAYDLGELDQALFLYLQSQDHHPSSVQDQRQSSGIR 77
           +SFGMMQ SS++IPG+ I SKD +GAYDLGELDQALF YL  Q+  PSS+Q+QRQ+SG+R
Sbjct: 70  VSFGMMQQSSSAIPGSLI-SKDSAGAYDLGELDQALFQYLDGQE--PSSIQEQRQNSGMR 126

Query: 76  -PTLNIFPSQPMHVEPST 26
            PTLNIFPSQPMHVEPST
Sbjct: 127 PPTLNIFPSQPMHVEPST 144


>ref|XP_003521195.1| PREDICTED: transcription factor HBP-1b(c1)-like [Glycine max]
          Length = 491

 Score =  105 bits (262), Expect = 4e-21
 Identities = 62/85 (72%), Positives = 70/85 (82%), Gaps = 6/85 (7%)
 Frame = -2

Query: 253 ISFGMMQSSAS---IPGNFITSKDPSGAYDLGELDQALFLYLQSQDHHPSSVQDQRQ--S 89
           ISFG+MQSS+S   IPGN++ SKD SGAYDLGELDQA FLYL  Q   PSSVQDQRQ  S
Sbjct: 53  ISFGLMQSSSSSSSIPGNYLGSKD-SGAYDLGELDQAFFLYLDGQ-ADPSSVQDQRQNSS 110

Query: 88  SGIR-PTLNIFPSQPMHVEPSTKES 17
           SG+R PTLNIFPS+PMHVEPS+ +S
Sbjct: 111 SGMRPPTLNIFPSKPMHVEPSSSKS 135


>ref|XP_002275147.1| PREDICTED: transcription factor HBP-1b(c1)-like [Vitis vinifera]
          Length = 491

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/87 (68%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 ISFGMMQSSAS--IPGNFITSKDPSGAYDLGELDQALFLYLQSQDHHPSSVQDQRQSSGI 80
           +S+GMMQSS+S  +PGNF+ SKDP GAYDLGELDQALFLYL    H PS++Q+QR +S I
Sbjct: 56  MSYGMMQSSSSSAMPGNFL-SKDP-GAYDLGELDQALFLYLDG--HDPSAIQEQRHNSDI 111

Query: 79  RP-TLNIFPSQPMHVEPSTKESASFVS 2
           RP TLNIFPSQPMHVEP  K S   VS
Sbjct: 112 RPPTLNIFPSQPMHVEPPIKASLGLVS 138


>ref|XP_003625220.1| Transcription factor, putative [Medicago truncatula]
           gi|355500235|gb|AES81438.1| Transcription factor,
           putative [Medicago truncatula]
          Length = 439

 Score =  103 bits (257), Expect = 1e-20
 Identities = 61/84 (72%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
 Frame = -2

Query: 253 ISFGMMQSSAS--IPGNFITSKDPSGAYDLGELDQALFLYLQSQDHHPSSVQDQRQ--SS 86
           ISFGMMQSS+S  + GN+I +KD SGAYDLGELDQALFLYL  Q   PSSVQDQ+Q  +S
Sbjct: 44  ISFGMMQSSSSPSVLGNYIRNKD-SGAYDLGELDQALFLYLNGQT-DPSSVQDQKQNSTS 101

Query: 85  GIR-PTLNIFPSQPMHVEPSTKES 17
           G+R PTLNIFPSQPMHVEPS+  S
Sbjct: 102 GMRPPTLNIFPSQPMHVEPSSSNS 125


>ref|XP_003625219.1| Transcription factor, putative [Medicago truncatula]
           gi|355500234|gb|AES81437.1| Transcription factor,
           putative [Medicago truncatula]
          Length = 465

 Score =  103 bits (257), Expect = 1e-20
 Identities = 61/84 (72%), Positives = 69/84 (82%), Gaps = 5/84 (5%)
 Frame = -2

Query: 253 ISFGMMQSSAS--IPGNFITSKDPSGAYDLGELDQALFLYLQSQDHHPSSVQDQRQ--SS 86
           ISFGMMQSS+S  + GN+I +KD SGAYDLGELDQALFLYL  Q   PSSVQDQ+Q  +S
Sbjct: 44  ISFGMMQSSSSPSVLGNYIRNKD-SGAYDLGELDQALFLYLNGQT-DPSSVQDQKQNSTS 101

Query: 85  GIR-PTLNIFPSQPMHVEPSTKES 17
           G+R PTLNIFPSQPMHVEPS+  S
Sbjct: 102 GMRPPTLNIFPSQPMHVEPSSSNS 125


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