BLASTX nr result

ID: Coptis23_contig00034176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034176
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]   197   1e-48
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...   197   1e-48
ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso...   196   1e-48
ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso...   196   1e-48
ref|XP_002318160.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48

>dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]
          Length = 489

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/111 (87%), Positives = 105/111 (94%)
 Frame = +1

Query: 1   GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGKIPAFSRECLRQN 180
           GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM+YNP KIPAFSRECL+QN
Sbjct: 363 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQN 422

Query: 181 VAVVIIGFPATVLPLARARICMSASHTREDLMKGLEVINRVGDLVGMKYLP 333
           VAVVI+GFPAT L LARARIC+SA+H+REDL K LEVI+RVGDLVG+KY P
Sbjct: 423 VAVVIVGFPATPLLLARARICISAAHSREDLNKALEVISRVGDLVGIKYFP 473


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
           gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
           long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/111 (87%), Positives = 105/111 (94%)
 Frame = +1

Query: 1   GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGKIPAFSRECLRQN 180
           GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM+YNP KIPAFSRECL+QN
Sbjct: 363 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQN 422

Query: 181 VAVVIIGFPATVLPLARARICMSASHTREDLMKGLEVINRVGDLVGMKYLP 333
           VAVVI+GFPAT L LARARIC+SA+H+REDL K LEVI+RVGDLVG+KY P
Sbjct: 423 VAVVIVGFPATPLLLARARICISAAHSREDLNKALEVISRVGDLVGIKYFP 473


>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
           gi|297734488|emb|CBI15735.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  196 bits (499), Expect = 1e-48
 Identities = 97/111 (87%), Positives = 104/111 (93%)
 Frame = +1

Query: 1   GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGKIPAFSRECLRQN 180
           GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM+YNP KIPAFSRECL+QN
Sbjct: 387 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQN 446

Query: 181 VAVVIIGFPATVLPLARARICMSASHTREDLMKGLEVINRVGDLVGMKYLP 333
           VAVV + FPAT L LARARIC+SASHTREDL+KGLEVI+RVGDLV +KY P
Sbjct: 447 VAVVTVAFPATPLLLARARICISASHTREDLIKGLEVISRVGDLVAIKYFP 497


>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
          Length = 489

 Score =  196 bits (499), Expect = 1e-48
 Identities = 97/111 (87%), Positives = 104/111 (93%)
 Frame = +1

Query: 1   GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGKIPAFSRECLRQN 180
           GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM+YNP KIPAFSRECL+QN
Sbjct: 363 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQN 422

Query: 181 VAVVIIGFPATVLPLARARICMSASHTREDLMKGLEVINRVGDLVGMKYLP 333
           VAVV + FPAT L LARARIC+SASHTREDL+KGLEVI+RVGDLV +KY P
Sbjct: 423 VAVVTVAFPATPLLLARARICISASHTREDLIKGLEVISRVGDLVAIKYFP 473


>ref|XP_002318160.1| predicted protein [Populus trichocarpa] gi|222858833|gb|EEE96380.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  194 bits (493), Expect = 6e-48
 Identities = 95/111 (85%), Positives = 104/111 (93%)
 Frame = +1

Query: 1   GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGKIPAFSRECLRQN 180
           GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIM+YNP KIPAFSRECL+QN
Sbjct: 363 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQN 422

Query: 181 VAVVIIGFPATVLPLARARICMSASHTREDLMKGLEVINRVGDLVGMKYLP 333
           VAVV + FPAT L LARARIC+SASHT+EDL+K LEVI++VGDLVG+KY P
Sbjct: 423 VAVVTVAFPATPLLLARARICISASHTKEDLLKALEVISQVGDLVGIKYFP 473


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