BLASTX nr result

ID: Coptis23_contig00034173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034173
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323453.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002323453.1| predicted protein [Populus trichocarpa] gi|222868083|gb|EEF05214.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/70 (42%), Positives = 37/70 (52%)
 Frame = +2

Query: 2   RKXXXXXXXILSTEDNEKIVERSAALDTRYDLFTGKMGSPFPEGMDDEXXXXXXXXXXXX 181
           RK       +LST +N K VER+ +LD  Y+   G MGSPF E MDD+            
Sbjct: 540 RKAAEAAAAMLSTGNNGKFVERTGSLDNNYNPIPGNMGSPFSEDMDDDSPKKKNGNMLKK 599

Query: 182 IGDLWKKGPK 211
           IG LWK+G K
Sbjct: 600 IGVLWKRGQK 609


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