BLASTX nr result

ID: Coptis23_contig00034154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034154
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510564.1| multidrug resistance protein 1, 2, putative ...   171   7e-41
ref|XP_002301961.1| multidrug/pheromone exporter, MDR family, AB...   170   1e-40
dbj|BAJ53110.1| JHL20J20.17 [Jatropha curcas]                         169   2e-40
ref|XP_002279471.2| PREDICTED: ABC transporter B family member 1...   167   6e-40
emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera]   167   1e-39

>ref|XP_002510564.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223551265|gb|EEF52751.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1252

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/111 (74%), Positives = 97/111 (87%)
 Frame = +3

Query: 12   SRIKHGITVVSLVFIGVAVASVPIYMLHHYFYTLMGERLATRVRLSMFSAILPNEIGWFD 191
            S ++H I  V L+F+G+AV ++PIY+L HYFYTLMGERL  RVRLSMFSAIL NEIGWFD
Sbjct: 718  SEMRHEIQRVVLIFVGLAVITIPIYLLQHYFYTLMGERLTARVRLSMFSAILSNEIGWFD 777

Query: 192  LDENNTGSLVSNLAAEATLLRSTLADRVSTIVQNLALTVTAFIIAFTLSWR 344
            LDENNTGSL S LAA+ATL+RS LADR+ST+VQN+ALTVTA +IAFTLSWR
Sbjct: 778  LDENNTGSLTSTLAADATLVRSALADRLSTVVQNVALTVTACVIAFTLSWR 828


>ref|XP_002301961.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222843687|gb|EEE81234.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1219

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/114 (71%), Positives = 102/114 (89%)
 Frame = +3

Query: 9    DSRIKHGITVVSLVFIGVAVASVPIYMLHHYFYTLMGERLATRVRLSMFSAILPNEIGWF 188
            +S++K  + +V+L+F+G AV +VPIY+L HYFYTLMGERL TRVRLSMFSAIL NEIGWF
Sbjct: 692  NSQMKKEVHLVALIFVGAAVVTVPIYILQHYFYTLMGERLITRVRLSMFSAILCNEIGWF 751

Query: 189  DLDENNTGSLVSNLAAEATLLRSTLADRVSTIVQNLALTVTAFIIAFTLSWRTT 350
            DLDEN+TGSL S LAA+ATL+RSTLADR+ST+VQN++LTVTAF+I F+LSWR +
Sbjct: 752  DLDENSTGSLTSTLAADATLVRSTLADRLSTMVQNVSLTVTAFVIGFSLSWRVS 805


>dbj|BAJ53110.1| JHL20J20.17 [Jatropha curcas]
          Length = 1135

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/111 (73%), Positives = 96/111 (86%)
 Frame = +3

Query: 12  SRIKHGITVVSLVFIGVAVASVPIYMLHHYFYTLMGERLATRVRLSMFSAILPNEIGWFD 191
           S +KH I  V+ +F+G+AV ++PIY+L HYFYTLMGERL  RVRLSMF+AIL NEIGWFD
Sbjct: 602 SEMKHEIRRVAFIFVGLAVVTIPIYLLQHYFYTLMGERLTARVRLSMFTAILSNEIGWFD 661

Query: 192 LDENNTGSLVSNLAAEATLLRSTLADRVSTIVQNLALTVTAFIIAFTLSWR 344
           LDENNTGSL S LAA+ATL+RS LADR+STIVQN+ALT TA +IAFTLSWR
Sbjct: 662 LDENNTGSLTSTLAADATLVRSALADRLSTIVQNVALTATACVIAFTLSWR 712


>ref|XP_002279471.2| PREDICTED: ABC transporter B family member 13-like [Vitis vinifera]
          Length = 1254

 Score =  167 bits (424), Expect = 6e-40
 Identities = 81/112 (72%), Positives = 97/112 (86%)
 Frame = +3

Query: 9    DSRIKHGITVVSLVFIGVAVASVPIYMLHHYFYTLMGERLATRVRLSMFSAILPNEIGWF 188
            D +IK  +  +SL+F+G A+ ++ IY+L HYFYTLMGERL TR+RL MFSAIL NEIGWF
Sbjct: 718  DFQIKREVDHISLIFVGAAILTIFIYLLQHYFYTLMGERLTTRIRLLMFSAILSNEIGWF 777

Query: 189  DLDENNTGSLVSNLAAEATLLRSTLADRVSTIVQNLALTVTAFIIAFTLSWR 344
            DLDEN+TGSL S LAA+ATL+RS LADR+STIVQN+ALTVTAF+IAFTLSWR
Sbjct: 778  DLDENSTGSLTSKLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLSWR 829


>emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera]
          Length = 1344

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/112 (72%), Positives = 96/112 (85%)
 Frame = +3

Query: 9    DSRIKHGITVVSLVFIGVAVASVPIYMLHHYFYTLMGERLATRVRLSMFSAILPNEIGWF 188
            D +IK  +  +SL+F+G A+ ++ IY+L HYFYTLMGERL TR+RL MFSAIL NEIGWF
Sbjct: 808  DFQIKREVDHISLIFVGAAILTIFIYLLQHYFYTLMGERLTTRIRLLMFSAILSNEIGWF 867

Query: 189  DLDENNTGSLVSNLAAEATLLRSTLADRVSTIVQNLALTVTAFIIAFTLSWR 344
            DLDEN+TGSL S LAA+ATL RS LADR+STIVQN+ALTVTAF+IAFTLSWR
Sbjct: 868  DLDENSTGSLTSKLAADATLXRSALADRLSTIVQNVALTVTAFVIAFTLSWR 919


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