BLASTX nr result

ID: Coptis23_contig00034147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034147
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...    55   6e-06

>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +3

Query: 21  LTDSGLQAALDGCPQLKYIVLRNCFNINLGGNLLKRCVLR 140
           LT+ GL A LDGCP L+++ LR CFNINL G+L KRC  R
Sbjct: 372 LTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFER 411


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