BLASTX nr result

ID: Coptis23_contig00034142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034142
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
gb|AAO42272.1| unknown protein [Arabidopsis thaliana]                 238   5e-61
ref|NP_001184967.1| O-Glycosyl hydrolases family 17 protein [Ara...   238   5e-61
ref|XP_003529639.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   236   1e-60
ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|2...   235   3e-60

>ref|XP_002316541.1| predicted protein [Populus trichocarpa] gi|222859606|gb|EEE97153.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  242 bits (618), Expect = 2e-62
 Identities = 115/167 (68%), Positives = 136/167 (81%), Gaps = 10/167 (5%)
 Frame = +3

Query: 3   YGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQP 182
           Y N TPVYLLHVSGSG+FLA DTTNQTYC+ MDGVDSK+LQAALDWACGPG++NCSEIQP
Sbjct: 299 YANATPVYLLHVSGSGTFLANDTTNQTYCIVMDGVDSKTLQAALDWACGPGQANCSEIQP 358

Query: 183 GEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQIN 362
           GE+CYQPNNVKNHASYAFDSYYQK+GR+A SCDFKGVAMITTTDPSHG+CIFPGSKK  N
Sbjct: 359 GENCYQPNNVKNHASYAFDSYYQKEGRAAGSCDFKGVAMITTTDPSHGSCIFPGSKKITN 418

Query: 363 KTKIESPSTNSTSNA----------QSRLSGRTQDFKAFIILLMTLI 473
           KT+    +T + SNA           SR+S   +  +AF+ ++ +++
Sbjct: 419 KTR-TVVNTTTPSNAAGGSRLISFRSSRISAMDKALQAFLTIIFSIL 464


>gb|AAO42272.1| unknown protein [Arabidopsis thaliana]
          Length = 332

 Score =  238 bits (607), Expect = 5e-61
 Identities = 113/158 (71%), Positives = 131/158 (82%)
 Frame = +3

Query: 3   YGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQP 182
           YGN TPVYLLHVSGSG+FLA DTTNQTYC+AMDGVD+K+LQAALDWACGPGRSNCSEIQP
Sbjct: 175 YGNSTPVYLLHVSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQP 234

Query: 183 GEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQIN 362
           GE CYQPNNVK HAS+AF+SYYQK+GR++ SCDFKGVAMITTTDPSHG+CIFPGSKK  N
Sbjct: 235 GESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGN 294

Query: 363 KTKIESPSTNSTSNAQSRLSGRTQDFKAFIILLMTLIT 476
           +T+      NST  A    + R+   + F + +M L+T
Sbjct: 295 RTQ---TVVNSTEVAAGEATSRSLS-RGFCVTIMILVT 328


>ref|NP_001184967.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
           gi|357529541|sp|O65399.3|E131_ARATH RecName: Full=Glucan
           endo-1,3-beta-glucosidase 1; AltName:
           Full=(1->3)-beta-glucan endohydrolase 1;
           Short=(1->3)-beta-glucanase 1; AltName:
           Full=Beta-1,3-endoglucanase 1; Short=Beta-1,3-glucanase
           1; Flags: Precursor gi|332190670|gb|AEE28791.1|
           O-Glycosyl hydrolases family 17 protein [Arabidopsis
           thaliana]
          Length = 511

 Score =  238 bits (607), Expect = 5e-61
 Identities = 113/158 (71%), Positives = 131/158 (82%)
 Frame = +3

Query: 3   YGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQP 182
           YGN TPVYLLHVSGSG+FLA DTTNQTYC+AMDGVD+K+LQAALDWACGPGRSNCSEIQP
Sbjct: 354 YGNSTPVYLLHVSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQP 413

Query: 183 GEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQIN 362
           GE CYQPNNVK HAS+AF+SYYQK+GR++ SCDFKGVAMITTTDPSHG+CIFPGSKK  N
Sbjct: 414 GESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGN 473

Query: 363 KTKIESPSTNSTSNAQSRLSGRTQDFKAFIILLMTLIT 476
           +T+      NST  A    + R+   + F + +M L+T
Sbjct: 474 RTQ---TVVNSTEVAAGEATSRSLS-RGFCVTIMILVT 507


>ref|XP_003529639.1| PREDICTED: glucan endo-1,3-beta-glucosidase 1-like [Glycine max]
          Length = 523

 Score =  236 bits (603), Expect = 1e-60
 Identities = 110/143 (76%), Positives = 124/143 (86%)
 Frame = +3

Query: 3   YGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQP 182
           YGN TP YLLHVSG G+FLA DTTNQTYC+AMDG DSK+LQAALDWACGPGR+NCSEIQP
Sbjct: 353 YGNTTPAYLLHVSGIGTFLANDTTNQTYCIAMDGFDSKTLQAALDWACGPGRANCSEIQP 412

Query: 183 GEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQIN 362
           GE C+QPNNVKNHASYAFDSYYQK+G++  SCDFKGVAMITTTDPSHG+CIFPGSKK  N
Sbjct: 413 GESCFQPNNVKNHASYAFDSYYQKEGKAQGSCDFKGVAMITTTDPSHGSCIFPGSKKVSN 472

Query: 363 KTKIESPSTNSTSNAQSRLSGRT 431
           KTK E  ++  +SNA  +L  +T
Sbjct: 473 KTK-EVVNSTISSNAGEKLRFKT 494


>ref|XP_002332610.1| predicted protein [Populus trichocarpa] gi|222832811|gb|EEE71288.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  235 bits (600), Expect = 3e-60
 Identities = 114/160 (71%), Positives = 130/160 (81%), Gaps = 2/160 (1%)
 Frame = +3

Query: 3   YGNVTPVYLLHVSGSGSFLAKDTTNQTYCVAMDGVDSKSLQAALDWACGPGRSNCSEIQP 182
           Y N TPVYLLHVSGSG+FLA DTTNQTYC+ MDGVDSK+LQAALDW CGPGR+NCSEIQP
Sbjct: 299 YANSTPVYLLHVSGSGTFLANDTTNQTYCIVMDGVDSKTLQAALDWVCGPGRANCSEIQP 358

Query: 183 GEDCYQPNNVKNHASYAFDSYYQKDGRSASSCDFKGVAMITTTDPSHGNCIFPGSKKQIN 362
           GE+CYQPNNVKNHASYAFDSYYQK+GR++ SCDFKG+AM TTTDPSHG+CIFPGSKK  N
Sbjct: 359 GENCYQPNNVKNHASYAFDSYYQKEGRASGSCDFKGIAMTTTTDPSHGSCIFPGSKKITN 418

Query: 363 KTKIESPSTN-STSNAQSRL-SGRTQDFKAFIILLMTLIT 476
           K +    +TN S +   SRL S ++    A    L TL+T
Sbjct: 419 KARTVVNTTNPSNAAGGSRLISFKSSRMSAVDKALQTLLT 458


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