BLASTX nr result

ID: Coptis23_contig00034107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034107
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF...   147   2e-33
emb|CBI19268.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|2...   122   7e-26
ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putativ...   117   1e-24
ref|XP_002866405.1| hypothetical protein ARALYDRAFT_358300 [Arab...   116   4e-24

>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
          Length = 1261

 Score =  147 bits (371), Expect = 2e-33
 Identities = 78/141 (55%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3    AMLLQSALSAKPNNVKNEDIETRRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPP 182
            AMLLQSAL  +P    N+D E++R+PLS+IGN   ++ AP+PN RKKW+KSVIQLV V P
Sbjct: 1121 AMLLQSALVDEPAEA-NDDCESKRKPLSEIGNKMARAKAPKPNPRKKWRKSVIQLVSVAP 1179

Query: 183  LSSQSDNTQAPTKPENNMVEQDVPLRLPRAMRSATSNNDPLRERNSVQADECVGKRVEGS 362
             SSQ +NT+AP K EN  VE D+PL+LPRAMRSA SN +P R RNS Q DE      E  
Sbjct: 1180 PSSQPENTEAPKKAENTAVEVDIPLKLPRAMRSAASNGNPFRVRNSDQPDESAANNKETV 1239

Query: 363  VVSPNSPTRQT-IISDKENHG 422
              +  SP RQ   + +KEN+G
Sbjct: 1240 ASASRSPVRQARTLDEKENYG 1260


>emb|CBI19268.3| unnamed protein product [Vitis vinifera]
          Length = 1279

 Score =  147 bits (371), Expect = 2e-33
 Identities = 78/141 (55%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3    AMLLQSALSAKPNNVKNEDIETRRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPP 182
            AMLLQSAL  +P    N+D E++R+PLS+IGN   ++ AP+PN RKKW+KSVIQLV V P
Sbjct: 1139 AMLLQSALVDEPAEA-NDDCESKRKPLSEIGNKMARAKAPKPNPRKKWRKSVIQLVSVAP 1197

Query: 183  LSSQSDNTQAPTKPENNMVEQDVPLRLPRAMRSATSNNDPLRERNSVQADECVGKRVEGS 362
             SSQ +NT+AP K EN  VE D+PL+LPRAMRSA SN +P R RNS Q DE      E  
Sbjct: 1198 PSSQPENTEAPKKAENTAVEVDIPLKLPRAMRSAASNGNPFRVRNSDQPDESAANNKETV 1257

Query: 363  VVSPNSPTRQT-IISDKENHG 422
              +  SP RQ   + +KEN+G
Sbjct: 1258 ASASRSPVRQARTLDEKENYG 1278


>ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|222842822|gb|EEE80369.1|
            predicted protein [Populus trichocarpa]
          Length = 1290

 Score =  122 bits (305), Expect = 7e-26
 Identities = 75/171 (43%), Positives = 99/171 (57%), Gaps = 31/171 (18%)
 Frame = +3

Query: 3    AMLLQSALSAKPNNVKNEDIETRRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPP 182
            AMLL+SAL  KP    ++ +   R+PLSDIGNT  KSNAP  N+RKKW+KSVIQLVPVPP
Sbjct: 1122 AMLLESALVEKPRETSDDSV-VGRKPLSDIGNTMAKSNAPNANQRKKWRKSVIQLVPVPP 1180

Query: 183  LSSQSDNTQAP------------------------------TKPENNMVEQDVPLRLPRA 272
             +++S+NT+A                               ++ +N   E ++PLRLPRA
Sbjct: 1181 PTTKSENTEAAPQKADDNGASEADIPLKLPRAMRSAAPNTVSETDNGASEAEIPLRLPRA 1240

Query: 273  MRSATSNNDPLRERNSVQADECVGKRVEGSVVSPNSPTRQTIISD-KENHG 422
            MRSA+     LR+RN+ QA+E + K  E  V+   SP R    SD KEN+G
Sbjct: 1241 MRSASHGGIFLRDRNADQAEESINK--ETGVLPTRSPARPKRTSDEKENYG 1289


>ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
            gi|223547129|gb|EEF48626.1| Chromosome-associated kinesin
            KIF4A, putative [Ricinus communis]
          Length = 1290

 Score =  117 bits (294), Expect = 1e-24
 Identities = 74/144 (51%), Positives = 99/144 (68%), Gaps = 4/144 (2%)
 Frame = +3

Query: 3    AMLLQSALSAKPNNVKNEDIETRRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPP 182
            AMLLQSAL  +P    N+D   RR+PLSDIGNT  KSNAP+ +++KKW+KS IQLVPV P
Sbjct: 1150 AMLLQSALVEQPA-ATNDDGPVRRKPLSDIGNTVAKSNAPKGDQKKKWRKSTIQLVPVVP 1208

Query: 183  L--SSQSDNTQAPTKPENNMV-EQDVPLRLPRAMRSATSNNDPLRERNSVQADECVGKRV 353
            L  ++Q + T+A  KP+NN   E D PL+LPRA+ +A++++  LRERN+ Q++E V K  
Sbjct: 1209 LPTTTQPEKTEAAQKPDNNSAGEVDGPLKLPRAI-AASNSSGLLRERNAGQSNEVVNK-- 1265

Query: 354  EGSVVSPNSPTRQTIIS-DKENHG 422
            E  V    SP R    S +KEN+G
Sbjct: 1266 ENVVHPTRSPARPPRTSEEKENYG 1289


>ref|XP_002866405.1| hypothetical protein ARALYDRAFT_358300 [Arabidopsis lyrata subsp.
            lyrata] gi|297312240|gb|EFH42664.1| hypothetical protein
            ARALYDRAFT_358300 [Arabidopsis lyrata subsp. lyrata]
          Length = 1341

 Score =  116 bits (290), Expect = 4e-24
 Identities = 79/154 (51%), Positives = 99/154 (64%), Gaps = 15/154 (9%)
 Frame = +3

Query: 3    AMLLQSALSAKPNNVKNEDIETRRR--PLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPV 176
            AMLLQ+AL+ KP    NED  TRRR  PLSDIGNT  KSN PRP++RKKWKK+V+QLVPV
Sbjct: 1187 AMLLQNALADKPGEETNEDGGTRRRRKPLSDIGNTTGKSNVPRPSQRKKWKKTVLQLVPV 1246

Query: 177  -PPLSSQSD------NTQAPTKPENNM--VEQDVPLRLPRAMRSATSN-NDPLRERNSVQ 326
             PP SSQ +      +++A   PEN+       + L+LPRAMRSA+SN ++ LRERN   
Sbjct: 1247 GPPASSQEEANPVTLDSEAARMPENSESGESNSIKLKLPRAMRSASSNGSNLLRERN--- 1303

Query: 327  ADECVGKRV-EGSVVSPNS--PTRQTIISDKENH 419
            AD+  G+ V  G  V  NS   +      +KENH
Sbjct: 1304 ADQTGGESVGNGGFVQSNSGRASGSRTSDEKENH 1337


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