BLASTX nr result

ID: Coptis23_contig00034081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034081
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
ref|XP_002522268.1| conserved hypothetical protein [Ricinus comm...   179   3e-43
ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265...   164   9e-39
emb|CBI30727.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32

>ref|XP_002305053.1| predicted protein [Populus trichocarpa] gi|222848017|gb|EEE85564.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  186 bits (473), Expect = 1e-45
 Identities = 78/89 (87%), Positives = 87/89 (97%)
 Frame = -2

Query: 268 EKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKG 89
           +KELYLGSKC+V+DTPNPWQFWMIMLKSGNMDTY+AKCPK+GH+VGP+GPD+ FPCFGKG
Sbjct: 76  DKELYLGSKCQVEDTPNPWQFWMIMLKSGNMDTYSAKCPKNGHRVGPFGPDTGFPCFGKG 135

Query: 88  CMNQPFIYHDYTTLQGPNRTTLRGSFYGS 2
           CMNQPFIYHDYTTLQGPNRTTL+G FYGS
Sbjct: 136 CMNQPFIYHDYTTLQGPNRTTLKGRFYGS 164


>ref|XP_002522268.1| conserved hypothetical protein [Ricinus communis]
           gi|223538521|gb|EEF40126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score =  179 bits (453), Expect = 3e-43
 Identities = 76/89 (85%), Positives = 84/89 (94%)
 Frame = -2

Query: 268 EKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKG 89
           EKELYLGSKC+V+DTP+PWQFWMIMLKSGNMDTYAAKCPK+G KVGP+G D  FPCFG+G
Sbjct: 132 EKELYLGSKCQVEDTPSPWQFWMIMLKSGNMDTYAAKCPKNGQKVGPFGSDPNFPCFGQG 191

Query: 88  CMNQPFIYHDYTTLQGPNRTTLRGSFYGS 2
           CMNQPFIYHDYTTL+GPNRTTL+G FYGS
Sbjct: 192 CMNQPFIYHDYTTLKGPNRTTLKGRFYGS 220


>ref|XP_002265152.2| PREDICTED: uncharacterized protein LOC100265127 [Vitis vinifera]
          Length = 514

 Score =  164 bits (414), Expect = 9e-39
 Identities = 69/89 (77%), Positives = 81/89 (91%)
 Frame = -2

Query: 268 EKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKG 89
           +KE+YLGSKC+V+DTP PWQFWMIMLKSGNMDTYAAKCPK+GHKVGPYGPD +FPCFG+G
Sbjct: 141 KKEIYLGSKCQVEDTPKPWQFWMIMLKSGNMDTYAAKCPKNGHKVGPYGPDDQFPCFGEG 200

Query: 88  CMNQPFIYHDYTTLQGPNRTTLRGSFYGS 2
           CMN P IYH+YTTL+G   +T++G FYGS
Sbjct: 201 CMNHPLIYHNYTTLRG---STMKGRFYGS 226


>emb|CBI30727.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  164 bits (414), Expect = 9e-39
 Identities = 69/89 (77%), Positives = 81/89 (91%)
 Frame = -2

Query: 268 EKELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKG 89
           +KE+YLGSKC+V+DTP PWQFWMIMLKSGNMDTYAAKCPK+GHKVGPYGPD +FPCFG+G
Sbjct: 94  KKEIYLGSKCQVEDTPKPWQFWMIMLKSGNMDTYAAKCPKNGHKVGPYGPDDQFPCFGEG 153

Query: 88  CMNQPFIYHDYTTLQGPNRTTLRGSFYGS 2
           CMN P IYH+YTTL+G   +T++G FYGS
Sbjct: 154 CMNHPLIYHNYTTLRG---STMKGRFYGS 179


>ref|XP_002300448.1| predicted protein [Populus trichocarpa] gi|222847706|gb|EEE85253.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  141 bits (355), Expect = 6e-32
 Identities = 58/88 (65%), Positives = 71/88 (80%)
 Frame = -2

Query: 265 KELYLGSKCEVDDTPNPWQFWMIMLKSGNMDTYAAKCPKDGHKVGPYGPDSRFPCFGKGC 86
           KE+YLG KC+V D P PWQFWMIM+KSGNMDT AA CP++G K  P+ P+ RFPCFG GC
Sbjct: 86  KEIYLGDKCQVQDNPRPWQFWMIMVKSGNMDTLAATCPQNGKKSTPFPPEPRFPCFGLGC 145

Query: 85  MNQPFIYHDYTTLQGPNRTTLRGSFYGS 2
           MN P +YH+YT+LQG N + L+GSFYG+
Sbjct: 146 MNMPLMYHNYTSLQGDNDSNLKGSFYGT 173


Top