BLASTX nr result

ID: Coptis23_contig00034072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034072
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266...    74   1e-11
ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229...    70   1e-10
ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cuc...    70   1e-10
ref|XP_004145045.1| PREDICTED: uncharacterized protein LOC101217...    70   1e-10
ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266667 [Vitis vinifera]
          Length = 1294

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
 Frame = -2

Query: 322  RSVKDCSGNH----VSPTGGAEANASLDASPAGKANLSGTACVTPTNCTTPIHAASPVCI 155
            R+ K   GN      SP  G E NA L          SG+ C TP N  TP +AASPVC+
Sbjct: 964  RASKHSEGNSDADPSSPAEGREGNAGLREM----CKPSGSVCTTPVNSVTPTNAASPVCM 1019

Query: 154  GNGYHKQSCRKKISRSSLLIELTRLDSNEISLSNSPASKDLRKRRDLASVR 2
            GN Y KQSC+K + R+SLL E+  L   +     + A KD R+RR++++VR
Sbjct: 1020 GNEYVKQSCKKNL-RTSLLKEINNL--TDTGPGPTSAVKDSRRRREISNVR 1067


>ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229012 [Cucumis sativus]
          Length = 1163

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253  DASPAGKANLSGTACVTPT-NCTTPIHAASPVCIGNGYHKQSCRKKISRSSLLIELTRLD 77
            D SP+ +   S T C +P+ N  TPI++ SPVC+G+ Y+KQSC+K +S+SSLL EL  L 
Sbjct: 856  DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLKELRDLT 915

Query: 76   SNEISLSNSPASKDLRKRRDLASVR 2
            S+     + P   + RKR+D+  VR
Sbjct: 916  SSGFVSRSCPT--ESRKRKDMTDVR 938


>ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cucumis sativus]
          Length = 917

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 DASPAGKANLSGTACVTPT-NCTTPIHAASPVCIGNGYHKQSCRKKISRSSLLIELTRLD 77
           D SP+ +   S T C +P+ N  TPI++ SPVC+G+ Y+KQSC+K +S+SSLL EL  L 
Sbjct: 610 DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLKELRDLT 669

Query: 76  SNEISLSNSPASKDLRKRRDLASVR 2
           S+     + P   + RKR+D+  VR
Sbjct: 670 SSGFVSRSCPT--ESRKRKDMTDVR 692


>ref|XP_004145045.1| PREDICTED: uncharacterized protein LOC101217520 [Cucumis sativus]
          Length = 1153

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253  DASPAGKANLSGTACVTPT-NCTTPIHAASPVCIGNGYHKQSCRKKISRSSLLIELTRLD 77
            D SP+ +   S T C +P+ N  TPI++ SPVC+G+ Y+KQSC+K +S+SSLL EL  L 
Sbjct: 846  DESPSKRHKPSVTVCTSPSDNSMTPINSVSPVCMGSEYYKQSCKKNLSKSSLLKELRDLT 905

Query: 76   SNEISLSNSPASKDLRKRRDLASVR 2
            S+     + P   + RKR+D+  VR
Sbjct: 906  SSGFVSRSCPT--ESRKRKDMTDVR 928


>ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|222863432|gb|EEF00563.1|
            predicted protein [Populus trichocarpa]
          Length = 1102

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289  SPTGGAEANA-SLDASPAGKANLSGTACVTPTNCTTPIHAASPVCIGNGYHKQSCRKKIS 113
            SP+   E N  S D     K     +AC +P  C TP++AASPVC+G+ Y KQSCRK +S
Sbjct: 821  SPSAANEVNVPSSDNLSREKTKSYESACASPGICMTPVNAASPVCMGSEY-KQSCRKNLS 879

Query: 112  RSSLLIELTRLDSNEISLSNSPASKDLRKRRDLASVR 2
            R+ L+ E++ L +      + P  KD RKRRDL+ VR
Sbjct: 880  RACLVKEMSSLCAAWTGPISEP--KDTRKRRDLSDVR 914


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