BLASTX nr result

ID: Coptis23_contig00034066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034066
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513121.1| conserved hypothetical protein [Ricinus comm...   145   4e-33
ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_004171767.1| PREDICTED: uncharacterized protein LOC101226...   137   7e-31
ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cu...   137   7e-31
ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis v...   137   1e-30

>ref|XP_002513121.1| conserved hypothetical protein [Ricinus communis]
           gi|223548132|gb|EEF49624.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score =  145 bits (365), Expect = 4e-33
 Identities = 65/84 (77%), Positives = 76/84 (90%)
 Frame = -3

Query: 254 PSPPPEVMYKWHLPEPNLRKVSDESDCLLAKSRTVVVLLGWLGAKQKHLKRYADWYTSRG 75
           P+ PP+V+Y+WHLPEP+   VS  SDC  AKSRTVVVLLGWLG+KQKHLK+YA+WYTSRG
Sbjct: 132 PTSPPDVLYRWHLPEPDAIDVSGSSDCSSAKSRTVVVLLGWLGSKQKHLKKYAEWYTSRG 191

Query: 74  YNVITFTFPMNEILSYQVGGKAEQ 3
           ++VITFTFPM+EILSYQVGGKAEQ
Sbjct: 192 FHVITFTFPMSEILSYQVGGKAEQ 215


>ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|222855820|gb|EEE93367.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/117 (62%), Positives = 90/117 (76%), Gaps = 4/117 (3%)
 Frame = -3

Query: 341 IASHPSVLALHRSAGSLHAAGFNDSRHFK----PSPPPEVMYKWHLPEPNLRKVSDESDC 174
           +AS P +++L++SA    A G   S  FK    P+  P+++Y+WHLPEP+   VS  SDC
Sbjct: 106 VASSPLLVSLYQSAEL--AKGPKPSA-FKTTNIPTSSPDILYRWHLPEPSTIDVSGSSDC 162

Query: 173 LLAKSRTVVVLLGWLGAKQKHLKRYADWYTSRGYNVITFTFPMNEILSYQVGGKAEQ 3
           L  KSRTVVVLLGWLG+KQKHLK+YA+WYTSRG++VITFTFPM EIL YQVGGKAEQ
Sbjct: 163 LSEKSRTVVVLLGWLGSKQKHLKKYAEWYTSRGFHVITFTFPMAEILCYQVGGKAEQ 219


>ref|XP_004171767.1| PREDICTED: uncharacterized protein LOC101226632, partial [Cucumis
           sativus]
          Length = 234

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/83 (74%), Positives = 71/83 (85%)
 Frame = -3

Query: 251 SPPPEVMYKWHLPEPNLRKVSDESDCLLAKSRTVVVLLGWLGAKQKHLKRYADWYTSRGY 72
           SPP EVMY+WHLPEP    ++  S C +AKSRTVVVLLGWLGAKQKHLKRYA+WYTSRG+
Sbjct: 137 SPPSEVMYRWHLPEPTSLDITGSSACSVAKSRTVVVLLGWLGAKQKHLKRYAEWYTSRGF 196

Query: 71  NVITFTFPMNEILSYQVGGKAEQ 3
           + ITFTFPM EIL+YQ+GGK EQ
Sbjct: 197 HAITFTFPMAEILTYQLGGKVEQ 219


>ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cucumis sativus]
          Length = 442

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/83 (74%), Positives = 71/83 (85%)
 Frame = -3

Query: 251 SPPPEVMYKWHLPEPNLRKVSDESDCLLAKSRTVVVLLGWLGAKQKHLKRYADWYTSRGY 72
           SPP EVMY+WHLPEP    ++  S C +AKSRTVVVLLGWLGAKQKHLKRYA+WYTSRG+
Sbjct: 133 SPPSEVMYRWHLPEPTSLDITGSSACSVAKSRTVVVLLGWLGAKQKHLKRYAEWYTSRGF 192

Query: 71  NVITFTFPMNEILSYQVGGKAEQ 3
           + ITFTFPM EIL+YQ+GGK EQ
Sbjct: 193 HAITFTFPMAEILTYQLGGKVEQ 215


>ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis vinifera]
          Length = 442

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/118 (55%), Positives = 86/118 (72%)
 Frame = -3

Query: 356 LFVSPIASHPSVLALHRSAGSLHAAGFNDSRHFKPSPPPEVMYKWHLPEPNLRKVSDESD 177
           L  S + S P+++ L++SA    A      +H  P+   +V+Y+WHLP+PN   V ++SD
Sbjct: 99  LLSSSVVSSPTLINLYQSAELAKAPKPTTFKHSIPALASDVLYRWHLPDPNACDVLEDSD 158

Query: 176 CLLAKSRTVVVLLGWLGAKQKHLKRYADWYTSRGYNVITFTFPMNEILSYQVGGKAEQ 3
           C   KSRTVVVLLGWLGA+QKHLKRYA+ YTS G++ ITFTFPM E+LSY+VGGKAEQ
Sbjct: 159 CSSVKSRTVVVLLGWLGARQKHLKRYAELYTSMGFHAITFTFPMAEVLSYKVGGKAEQ 216


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