BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034064
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like...    78   1e-12
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]    69   6e-10
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ...    55   1e-05

>ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like [Vitis vinifera]
          Length = 304

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 44/78 (56%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +1

Query: 49  DGGLIIEIPSLT-DGFSSLSPSPSRFTEEEMKSPMTTXXXXXXXXXXXDKRSIPCSPSCV 225
           DG L+I+IP  T + FSSLSPS    +EEE+KSPMTT           +KR +PCSP  V
Sbjct: 228 DGMLVIDIPRQTAENFSSLSPSTGGTSEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSV 287

Query: 226 DVELGEGGRGQSSKSTPD 279
           DVE  +GGRGQSSKST D
Sbjct: 288 DVE--QGGRGQSSKSTLD 303


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +1

Query: 49  DGGLIIEIPSLT-DGFSSLSPSPSRFTEEEMKSPMTTXXXXXXXXXXXDKRSIPCSPSCV 225
           DG L+I+IP  T + FSSLSPS    +EEE+KSPMTT           +KR +PCSP  V
Sbjct: 228 DGMLVIDIPRQTAENFSSLSPSTGGTSEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSV 287

Query: 226 DVELGEGGRGQS 261
           DVE  +GGRGQ+
Sbjct: 288 DVE--QGGRGQN 297


>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 314

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/64 (51%), Positives = 37/64 (57%)
 Frame = +1

Query: 43  RRDGGLIIEIPSLTDGFSSLSPSPSRFTEEEMKSPMTTXXXXXXXXXXXDKRSIPCSPSC 222
           R  G L+I+IPS     SSLSPS SR  EEE+KSPM             DK+  PCSPS 
Sbjct: 248 RCHGMLVIDIPSECTS-SSLSPSGSRCAEEEVKSPMAATLRSFKRLLSRDKKLSPCSPSS 306

Query: 223 VDVE 234
           VDVE
Sbjct: 307 VDVE 310