BLASTX nr result

ID: Coptis23_contig00034063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034063
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246...   311   2e-82
emb|CBI31609.3| unnamed protein product [Vitis vinifera]              311   2e-82
ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativ...   260   4e-67
ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|2...   260   4e-67

>ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera]
          Length = 805

 Score =  311 bits (796), Expect = 2e-82
 Identities = 173/297 (58%), Positives = 212/297 (71%), Gaps = 4/297 (1%)
 Frame = +1

Query: 1    LGSTPTASSKR-DDSLPATPPEAWGGEWVSDKFDHLRQPSTFPSHFGMSTSEAATSGSM- 174
            LGSTP  SSK  +DS+  TPPEAWGGE +SDKF H RQ +  PS FGM T+   TSGSM 
Sbjct: 512  LGSTPAPSSKSGEDSI--TPPEAWGGERLSDKFAHHRQSANLPSRFGMLTTSGLTSGSML 569

Query: 175  AGLYXXXXXXXXXXXXXXXXXXXXYAYMRMKDISSNIDTSLGATEHAPSSSMTTSLGTKG 354
            +GL                     YA +R KD+SS+ +TSLG +EH P SS++ SLGTKG
Sbjct: 570  SGLQDLSVSTSQTSMSSLSNSNLGYANLRPKDVSSSQETSLGFSEHVPFSSISMSLGTKG 629

Query: 355  IVGQANLESPRITSLTQPRRYSSYAERISTTPSFSDGTILASGSPKAKKTGAETREEL-- 528
            + GQ NLE P  TSL  PRR+S+YAERI TT SFSDG  L+ GSPK KK+GAETREEL  
Sbjct: 630  VTGQTNLELPGPTSLNLPRRFSTYAERIGTTSSFSDGISLSMGSPKTKKSGAETREELLH 689

Query: 529  NLLSRPDISASTGAGMLMNTNGGTPQSQTGPLQSDLQRGTSSFELQLVQRTVEETLASVQ 708
            +LLSR DIS +   G+L + NGGT Q Q  P+Q+D Q+G +SF LQL QRT++ETL S Q
Sbjct: 690  SLLSRTDISTAMEPGILPSINGGTSQPQKAPIQTDSQQG-NSFTLQLFQRTLDETLGSFQ 748

Query: 709  KSIHDDTRNVHIELLRQFHIQEMEISSFMNSVLEKLAEVMKEVQSLRKENQELRQKL 879
            KSIH+D +N+HIE+LRQFHIQE ++SS M+S+L+   E+MKEVQSLRKENQ+LRQ L
Sbjct: 749  KSIHEDMKNLHIEILRQFHIQETDMSSVMSSILKNQVELMKEVQSLRKENQQLRQLL 805


>emb|CBI31609.3| unnamed protein product [Vitis vinifera]
          Length = 779

 Score =  311 bits (796), Expect = 2e-82
 Identities = 173/297 (58%), Positives = 212/297 (71%), Gaps = 4/297 (1%)
 Frame = +1

Query: 1    LGSTPTASSKR-DDSLPATPPEAWGGEWVSDKFDHLRQPSTFPSHFGMSTSEAATSGSM- 174
            LGSTP  SSK  +DS+  TPPEAWGGE +SDKF H RQ +  PS FGM T+   TSGSM 
Sbjct: 486  LGSTPAPSSKSGEDSI--TPPEAWGGERLSDKFAHHRQSANLPSRFGMLTTSGLTSGSML 543

Query: 175  AGLYXXXXXXXXXXXXXXXXXXXXYAYMRMKDISSNIDTSLGATEHAPSSSMTTSLGTKG 354
            +GL                     YA +R KD+SS+ +TSLG +EH P SS++ SLGTKG
Sbjct: 544  SGLQDLSVSTSQTSMSSLSNSNLGYANLRPKDVSSSQETSLGFSEHVPFSSISMSLGTKG 603

Query: 355  IVGQANLESPRITSLTQPRRYSSYAERISTTPSFSDGTILASGSPKAKKTGAETREEL-- 528
            + GQ NLE P  TSL  PRR+S+YAERI TT SFSDG  L+ GSPK KK+GAETREEL  
Sbjct: 604  VTGQTNLELPGPTSLNLPRRFSTYAERIGTTSSFSDGISLSMGSPKTKKSGAETREELLH 663

Query: 529  NLLSRPDISASTGAGMLMNTNGGTPQSQTGPLQSDLQRGTSSFELQLVQRTVEETLASVQ 708
            +LLSR DIS +   G+L + NGGT Q Q  P+Q+D Q+G +SF LQL QRT++ETL S Q
Sbjct: 664  SLLSRTDISTAMEPGILPSINGGTSQPQKAPIQTDSQQG-NSFTLQLFQRTLDETLGSFQ 722

Query: 709  KSIHDDTRNVHIELLRQFHIQEMEISSFMNSVLEKLAEVMKEVQSLRKENQELRQKL 879
            KSIH+D +N+HIE+LRQFHIQE ++SS M+S+L+   E+MKEVQSLRKENQ+LRQ L
Sbjct: 723  KSIHEDMKNLHIEILRQFHIQETDMSSVMSSILKNQVELMKEVQSLRKENQQLRQLL 779


>ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1|
            predicted protein [Populus trichocarpa]
          Length = 785

 Score =  288 bits (736), Expect = 2e-75
 Identities = 169/295 (57%), Positives = 200/295 (67%), Gaps = 3/295 (1%)
 Frame = +1

Query: 4    GSTPTASSKRDDSLPATPPEAWGGEWVSDKFDHLRQPSTFPSHFGMSTSEAATSGSM-AG 180
            GSTPT SSK +DS   TPPEAWGGE +SDK  HLRQP   P  FGM TS ++TSGSM + 
Sbjct: 495  GSTPTPSSKSEDS-SITPPEAWGGERLSDKIAHLRQPLNLPPRFGM-TSGSSTSGSMFSS 552

Query: 181  LYXXXXXXXXXXXXXXXXXXXXYAYMRMKDISSNIDTSLGATEHAPSSSMTTSLGTKGIV 360
            L                     ++ +R +D+S   +TS+G  EH  SSSM  SLG KGI 
Sbjct: 553  LQDLPSSTSQSSMSSLTSSSRGFSNLRARDVSLTQETSVGFPEHISSSSMFLSLGAKGIT 612

Query: 361  GQANLESPRITSLTQPRRYSSYAERISTTPSFSDGTILASGSPKAKKTGAETREEL--NL 534
            G ANLE+    SL  PRR+S+YAERISTT SFSDGT L+ GSPK KKTG ETREEL  +L
Sbjct: 613  GPANLETSGPASLNLPRRFSTYAERISTTSSFSDGTSLSVGSPKTKKTGVETREELLNSL 672

Query: 535  LSRPDISASTGAGMLMNTNGGTPQSQTGPLQSDLQRGTSSFELQLVQRTVEETLASVQKS 714
            L R D  A T  G++   NGG  Q     LQ D Q+G SSF LQL QRT+EETL S QKS
Sbjct: 673  LLRSDALAVTEPGIVPAMNGGATQPHKA-LQPDTQQG-SSFTLQLFQRTLEETLDSFQKS 730

Query: 715  IHDDTRNVHIELLRQFHIQEMEISSFMNSVLEKLAEVMKEVQSLRKENQELRQKL 879
            IH+D RN+HIE+LRQFH+QEME SS M+S+LE  AE+MKE+++LRKENQELRQ L
Sbjct: 731  IHEDMRNLHIEILRQFHMQEMEFSSVMSSILENQAELMKEIKTLRKENQELRQLL 785


>ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativus]
            gi|449495290|ref|XP_004159790.1| PREDICTED: protein
            NEDD1-like [Cucumis sativus]
          Length = 799

 Score =  260 bits (664), Expect = 4e-67
 Identities = 157/299 (52%), Positives = 204/299 (68%), Gaps = 6/299 (2%)
 Frame = +1

Query: 1    LGSTP--TASSKRDDSLPATPPEAWGGEWVSDKFDHLRQPSTFPSHFGM--STSEAATSG 168
            LGSTP  T +SK +DS   TPPEAWGGE +S+KF  LRQP T PS FGM  S+S + TS 
Sbjct: 505  LGSTPAPTVNSKNEDS-SITPPEAWGGEKLSEKFAQLRQPMTLPSRFGMLASSSSSQTSS 563

Query: 169  SM-AGLYXXXXXXXXXXXXXXXXXXXXYAYMRMKDISSNIDTSLGATEHAPSSSMTTSLG 345
            SM +GL                     Y  +R KD +S  + SL   EH  +++ + SLG
Sbjct: 564  SMISGLQDPSSSISQSSITSLTNLNFSYPNLRTKDATSQ-EVSLSIPEHFSTTAASLSLG 622

Query: 346  TKGIVGQANLESPRITSLTQPRRYSSYAERISTTPSFSDGTILASGSPKAKKTGAETREE 525
            T+  +G +N +SPR +++T PRR+S+YAER+STT SFSDG  L +GSPK KK G+ETREE
Sbjct: 623  TRVNIGLSNTDSPRPSTMTLPRRFSTYAERLSTTSSFSDG--LPAGSPKTKKLGSETREE 680

Query: 526  -LNLLSRPDISASTGAGMLMNTNGGTPQSQTGPLQSDLQRGTSSFELQLVQRTVEETLAS 702
             LN L++ D  + T +G+    NGG  Q Q  PLQSD Q+G +SF LQL QRT+EETL S
Sbjct: 681  VLNNLAKFDTLSVTESGIPPAMNGGLLQPQK-PLQSDAQQG-NSFTLQLFQRTLEETLDS 738

Query: 703  VQKSIHDDTRNVHIELLRQFHIQEMEISSFMNSVLEKLAEVMKEVQSLRKENQELRQKL 879
             Q+SIHDD RN+H+E+LRQFH+QEME+SS  +++LE  AE++KEV+SLRKENQ+LR  L
Sbjct: 739  FQRSIHDDMRNLHLEILRQFHMQEMEMSSVTSTILENQAELIKEVKSLRKENQQLRDLL 797


>ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|222864238|gb|EEF01369.1|
            predicted protein [Populus trichocarpa]
          Length = 777

 Score =  260 bits (664), Expect = 4e-67
 Identities = 155/288 (53%), Positives = 191/288 (66%), Gaps = 3/288 (1%)
 Frame = +1

Query: 4    GSTPTASSKRDDSLPATPPEAWGGEWVSDKFDHLRQPSTFPSHFGMSTSEAATSGSM-AG 180
            GSTP+ SSK +DS   TPPEAWGGE +SD   HL QP   PS F M TS ++T GSM + 
Sbjct: 494  GSTPSPSSKSEDS-SITPPEAWGGERLSDSIAHLPQPLNLPSRFAM-TSGSSTLGSMFSS 551

Query: 181  LYXXXXXXXXXXXXXXXXXXXXYAYMRMKDISSNIDTSLGATEHAPSSSMTTSLGTKGIV 360
            L                     ++ +  +D+S N +TS+G  EH  SSSM+ SLGTK I 
Sbjct: 552  LQDLSSSTNQTGTSSLNNSSCSFSNLHTRDVSLNQETSMGFPEHISSSSMSLSLGTKHIT 611

Query: 361  GQANLESPRITSLTQPRRYSSYAERISTTPSFSDGTILASGSPKAKKTGAETREEL--NL 534
              A+LE+    SL QPRR+S++AERI+TT SFSDGT L+  SPK KKTG ETREEL  ++
Sbjct: 612  ELASLEASGPASLNQPRRFSTFAERINTTASFSDGTSLSVVSPKTKKTGVETREELLNSI 671

Query: 535  LSRPDISASTGAGMLMNTNGGTPQSQTGPLQSDLQRGTSSFELQLVQRTVEETLASVQKS 714
            LSR D  A T  G+L   NGG  Q     LQ D Q+G SSF LQL QRT+EETL S QKS
Sbjct: 672  LSRSDALAVTEPGILPAMNGGATQPHK-ILQPDTQQG-SSFTLQLFQRTLEETLDSFQKS 729

Query: 715  IHDDTRNVHIELLRQFHIQEMEISSFMNSVLEKLAEVMKEVQSLRKEN 858
            IH+D R++HIE+LRQFH+QEME+S  MNS+LE  AE+MKE++SL KEN
Sbjct: 730  IHEDMRSLHIEILRQFHMQEMELSGVMNSILENQAELMKEIKSLGKEN 777


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