BLASTX nr result
ID: Coptis23_contig00034056
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00034056 (351 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 emb|CBI32505.3| unnamed protein product [Vitis vinifera] 72 5e-11 ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ... 71 1e-10 ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm... 71 1e-10 gb|ABR16110.1| unknown [Picea sitchensis] 57 7e-08 >ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1| predicted protein [Populus trichocarpa] Length = 548 Score = 74.7 bits (182), Expect = 7e-12 Identities = 35/52 (67%), Positives = 39/52 (75%) Frame = +2 Query: 2 FILLFVLGFVKAAIFSPFVFLVIAFGDTGVIIGL*PLHLFWIACCISKHHLF 157 F+ LF LG +K AIFSPFVFLVIAFGDTG++IGL PLHL W CI K F Sbjct: 21 FLFLFFLGCIKGAIFSPFVFLVIAFGDTGIVIGLWPLHLIWSMYCIIKSKRF 72 >emb|CBI32505.3| unnamed protein product [Vitis vinifera] Length = 1019 Score = 72.0 bits (175), Expect = 5e-11 Identities = 32/52 (61%), Positives = 38/52 (73%) Frame = +2 Query: 2 FILLFVLGFVKAAIFSPFVFLVIAFGDTGVIIGL*PLHLFWIACCISKHHLF 157 F+LLF LG +K IFSPFVFLVIAFGD GV++GL P HL W CI++ F Sbjct: 21 FVLLFALGIIKGGIFSPFVFLVIAFGDIGVVVGLWPCHLVWTVYCINRTKKF 72 >ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis vinifera] Length = 547 Score = 70.9 bits (172), Expect = 1e-10 Identities = 32/52 (61%), Positives = 37/52 (71%) Frame = +2 Query: 2 FILLFVLGFVKAAIFSPFVFLVIAFGDTGVIIGL*PLHLFWIACCISKHHLF 157 F+LLF LG +K IFSPFVFLVIAFGD GV++GL P HL W CI + F Sbjct: 21 FVLLFALGIIKGGIFSPFVFLVIAFGDIGVVVGLWPCHLVWTVYCIVRTKKF 72 >ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis] gi|223538447|gb|EEF40053.1| conserved hypothetical protein [Ricinus communis] Length = 550 Score = 70.9 bits (172), Expect = 1e-10 Identities = 33/51 (64%), Positives = 38/51 (74%) Frame = +2 Query: 5 ILLFVLGFVKAAIFSPFVFLVIAFGDTGVIIGL*PLHLFWIACCISKHHLF 157 +LLF+L +K AIFSPFV LVIAFGDTGV+IGL PLHL W C+ K F Sbjct: 22 VLLFILAIIKGAIFSPFVLLVIAFGDTGVVIGLWPLHLVWSIYCLIKTKKF 72 >gb|ABR16110.1| unknown [Picea sitchensis] Length = 605 Score = 56.6 bits (135), Expect(2) = 7e-08 Identities = 25/46 (54%), Positives = 32/46 (69%) Frame = +2 Query: 2 FILLFVLGFVKAAIFSPFVFLVIAFGDTGVIIGL*PLHLFWIACCI 139 FILLF+LG +K AIF P V+LVI G++ VI GL P H+ W C+ Sbjct: 21 FILLFLLGIIKGAIFCPVVWLVITIGNSAVIFGLWPAHVIWTYVCV 66 Score = 24.6 bits (52), Expect(2) = 7e-08 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 235 LKTLLILTLPMPISLWTVMAL 297 LK +L + LP+P+ LW ++ L Sbjct: 76 LKAVLCIGLPVPLILWPLVGL 96