BLASTX nr result

ID: Coptis23_contig00034041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034041
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519046.1| conserved hypothetical protein [Ricinus comm...   177   8e-43
ref|XP_003542756.1| PREDICTED: uncharacterized protein LOC100785...   171   6e-41
ref|XP_003637395.1| hypothetical protein MTR_084s0018 [Medicago ...   171   6e-41
ref|XP_004134711.1| PREDICTED: uncharacterized protein LOC101206...   166   2e-39
ref|XP_002305143.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>ref|XP_002519046.1| conserved hypothetical protein [Ricinus communis]
           gi|223541709|gb|EEF43257.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score =  177 bits (449), Expect = 8e-43
 Identities = 74/91 (81%), Positives = 80/91 (87%)
 Frame = +2

Query: 20  MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 199
           MLP +WTPPCGS+CT+KY+ALTQIPWRVFCKKGCD D  TWEECL EC+E CYKDPVFKD
Sbjct: 1   MLPHQWTPPCGSQCTHKYAALTQIPWRVFCKKGCDADGETWEECLSECNEICYKDPVFKD 60

Query: 200 QQWSAYIDRSPGADSYSVECFRACVTGCGYK 292
           QQWSAYIDRSPGA  YS ECF ACV GCGY+
Sbjct: 61  QQWSAYIDRSPGAARYSEECFHACVAGCGYR 91


>ref|XP_003542756.1| PREDICTED: uncharacterized protein LOC100785317 [Glycine max]
          Length = 139

 Score =  171 bits (433), Expect = 6e-41
 Identities = 70/91 (76%), Positives = 81/91 (89%)
 Frame = +2

Query: 20  MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 199
           M+PQ+W  PCG++CTNKY+ALT+IPWRVFCKKGCD+D  TWEECL +C++ CYKDPV KD
Sbjct: 1   MIPQQWASPCGNQCTNKYAALTKIPWRVFCKKGCDSDGETWEECLEDCNQICYKDPVLKD 60

Query: 200 QQWSAYIDRSPGADSYSVECFRACVTGCGYK 292
           QQWSAYIDRSPGA SYS ECF ACV+GCGYK
Sbjct: 61  QQWSAYIDRSPGAASYSEECFHACVSGCGYK 91


>ref|XP_003637395.1| hypothetical protein MTR_084s0018 [Medicago truncatula]
           gi|355503330|gb|AES84533.1| hypothetical protein
           MTR_084s0018 [Medicago truncatula]
          Length = 188

 Score =  171 bits (433), Expect = 6e-41
 Identities = 67/97 (69%), Positives = 85/97 (87%)
 Frame = +2

Query: 2   KKKEKEMLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYK 181
           +++ + M+PQ+W  PCG+KCTNKY+ALT++PWRVFCKKGC++D  TWEECL +C++ CYK
Sbjct: 39  RRRRRRMIPQQWASPCGNKCTNKYAALTKLPWRVFCKKGCNSDGETWEECLEDCNQLCYK 98

Query: 182 DPVFKDQQWSAYIDRSPGADSYSVECFRACVTGCGYK 292
           DPV KDQQWSAYIDRSPG+ +YS ECF ACV+GCGYK
Sbjct: 99  DPVLKDQQWSAYIDRSPGSATYSEECFHACVSGCGYK 135


>ref|XP_004134711.1| PREDICTED: uncharacterized protein LOC101206260 isoform 2 [Cucumis
           sativus] gi|449433855|ref|XP_004134712.1| PREDICTED:
           uncharacterized protein LOC101206260 isoform 3 [Cucumis
           sativus] gi|449521307|ref|XP_004167671.1| PREDICTED:
           uncharacterized LOC101206260 isoform 2 [Cucumis sativus]
           gi|449521309|ref|XP_004167672.1| PREDICTED:
           uncharacterized LOC101206260 isoform 3 [Cucumis sativus]
          Length = 139

 Score =  166 bits (420), Expect = 2e-39
 Identities = 68/91 (74%), Positives = 77/91 (84%)
 Frame = +2

Query: 20  MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 199
           M+PQ+W  PCG++CT KY+ALTQIPWRVFCKKGCD D   W+ECL EC E CYKDPVFKD
Sbjct: 2   MIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKD 61

Query: 200 QQWSAYIDRSPGADSYSVECFRACVTGCGYK 292
            QWSAYIDRSPG+ SYS ECF ACV+GCG+K
Sbjct: 62  HQWSAYIDRSPGSASYSEECFHACVSGCGFK 92


>ref|XP_002305143.1| predicted protein [Populus trichocarpa] gi|222848107|gb|EEE85654.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  166 bits (420), Expect = 2e-39
 Identities = 68/91 (74%), Positives = 79/91 (86%)
 Frame = +2

Query: 20  MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 199
           MLP++WT PCG++CT K+SALTQIPWRVFCKKGC TD  TWE+CL EC+E CYKDPV KD
Sbjct: 1   MLPEQWTQPCGNQCTQKFSALTQIPWRVFCKKGCGTDGETWEDCLDECNEICYKDPVLKD 60

Query: 200 QQWSAYIDRSPGADSYSVECFRACVTGCGYK 292
           +QW+AYIDRSPG+ SYS ECF+AC  GCGYK
Sbjct: 61  RQWTAYIDRSPGSASYSEECFKACKAGCGYK 91


Top