BLASTX nr result

ID: Coptis23_contig00034032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034032
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301542.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002273071.2| PREDICTED: uncharacterized protein LOC100257...   171   6e-41
emb|CBI37016.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002515207.1| nucleotide binding protein, putative [Ricinu...   166   2e-39
ref|XP_003553679.1| PREDICTED: uncharacterized protein LOC100780...   155   4e-36

>ref|XP_002301542.1| predicted protein [Populus trichocarpa] gi|222843268|gb|EEE80815.1|
           predicted protein [Populus trichocarpa]
          Length = 1455

 Score =  182 bits (463), Expect = 2e-44
 Identities = 91/158 (57%), Positives = 107/158 (67%)
 Frame = +2

Query: 2   LVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXXXXXXXAFTW 181
           L  +SE++PIVCMD LS+ +   S  ++DWVA+GDGKGN                   TW
Sbjct: 517 LAQLSEEVPIVCMDLLSKKLPKHSNGVDDWVALGDGKGNMTIVRIMGDVFTPEVGFTVTW 576

Query: 182 SAGMERQLLGIYWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSFKALLTAEFT 361
           SAG ERQLLG YWCK LG  +IFTADPRGILKLW    PL SG      +F A L AEFT
Sbjct: 577 SAGKERQLLGTYWCKALGCRFIFTADPRGILKLWRLSDPLPSGSLTYGRTFDASLIAEFT 636

Query: 362 SCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLL 475
           SCFG RIMCLDASF+ +VL+CGD RGNL++F LS+GLL
Sbjct: 637 SCFGIRIMCLDASFEDEVLVCGDLRGNLVLFPLSKGLL 674


>ref|XP_002273071.2| PREDICTED: uncharacterized protein LOC100257191 [Vitis vinifera]
          Length = 1404

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/161 (54%), Positives = 102/161 (63%)
 Frame = +2

Query: 2   LVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXXXXXXXAFTW 181
           L+ VSE++PIVCMD LSR     S+ +EDW+AVGDGKGN                  +TW
Sbjct: 463 LIRVSEEVPIVCMDLLSRNGPKLSSGVEDWIAVGDGKGNMTVTGIVSDLCPPKVGLTYTW 522

Query: 182 SAGMERQLLGIYWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSFKALLTAEFT 361
           SAG+ERQLLG +WCK LG  YIFTADPRG LKLW  C P  S    +  S    L AEF 
Sbjct: 523 SAGIERQLLGTFWCKSLGYRYIFTADPRGKLKLWRLCNPSQSASQNSAISNNVSLIAEFI 582

Query: 362 SCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLLTTS 484
           S F  RIMCLDAS + +VLICGD RGNLI++ L R +L  S
Sbjct: 583 SSFNIRIMCLDASSEEEVLICGDLRGNLILYPLLRSILVGS 623


>emb|CBI37016.3| unnamed protein product [Vitis vinifera]
          Length = 1324

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/161 (54%), Positives = 102/161 (63%)
 Frame = +2

Query: 2   LVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXXXXXXXAFTW 181
           L+ VSE++PIVCMD LSR     S+ +EDW+AVGDGKGN                  +TW
Sbjct: 442 LIRVSEEVPIVCMDLLSRNGPKLSSGVEDWIAVGDGKGNMTVTGIVSDLCPPKVGLTYTW 501

Query: 182 SAGMERQLLGIYWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSFKALLTAEFT 361
           SAG+ERQLLG +WCK LG  YIFTADPRG LKLW  C P  S    +  S    L AEF 
Sbjct: 502 SAGIERQLLGTFWCKSLGYRYIFTADPRGKLKLWRLCNPSQSASQNSAISNNVSLIAEFI 561

Query: 362 SCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLLTTS 484
           S F  RIMCLDAS + +VLICGD RGNLI++ L R +L  S
Sbjct: 562 SSFNIRIMCLDASSEEEVLICGDLRGNLILYPLLRSILVGS 602


>ref|XP_002515207.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223545687|gb|EEF47191.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1385

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/161 (52%), Positives = 102/161 (63%)
 Frame = +2

Query: 2   LVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXXXXXXXAFTW 181
           LV VSE +PIVCMD LS+ +   S  ++DWVA+GDGKGN                   TW
Sbjct: 452 LVQVSEKVPIVCMDLLSKNLPRHSYGVDDWVALGDGKGNLTIVRVAGVVCTLDNNFTITW 511

Query: 182 SAGMERQLLGIYWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSFKALLTAEFT 361
           SA  ERQLLG YWCK LG  +IFTADPRG+LK+W    PL      +   F   L AEF+
Sbjct: 512 SAEKERQLLGTYWCKALGNRFIFTADPRGVLKIWKLPDPLLPVPHISARMFDVSLVAEFS 571

Query: 362 SCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLLTTS 484
           SCFG RIMCLDAS   +VL+CGD RGNL+++ L++GLL  S
Sbjct: 572 SCFGNRIMCLDASSSNEVLVCGDLRGNLVLYPLTKGLLLDS 612


>ref|XP_003553679.1| PREDICTED: uncharacterized protein LOC100780968 [Glycine max]
          Length = 1377

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/158 (49%), Positives = 93/158 (58%)
 Frame = +2

Query: 2   LVHVSEDMPIVCMDSLSRIVSDPSTVIEDWVAVGDGKGNXXXXXXXXXXXXXXXXXAFTW 181
           LV VS   PI+CMD LS+   +     EDW+A+GDGKGN                  FTW
Sbjct: 437 LVQVSNGAPIICMDLLSKDSFELDCGAEDWIAIGDGKGNMTVIGVSNDDCTPTVRLCFTW 496

Query: 182 SAGMERQLLGIYWCKLLGPSYIFTADPRGILKLWNFCRPLHSGCDEAMGSFKALLTAEFT 361
            A MERQLLG YWCK LG  Y+FTADPRG LKLW    P  S    +M S      AEFT
Sbjct: 497 PAEMERQLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPSQSDLPSSMRSNNVSCIAEFT 556

Query: 362 SCFGTRIMCLDASFDAQVLICGDQRGNLIMFTLSRGLL 475
           S +G RIMCLDA  + +VL CGD RGN+++F L + L+
Sbjct: 557 SNYGMRIMCLDACMEEEVLACGDVRGNMVLFPLLKNLV 594


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