BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034029
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19452.3| unnamed protein product [Vitis vinifera]              123   2e-26
gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indi...    74   2e-11
ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group] g...    74   2e-11
ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selagin...    71   8e-11

>emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/118 (52%), Positives = 82/118 (69%)
 Frame = -3

Query: 355 GIGLKVRIRVSLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETF 176
           G GL   IR + + MYS+CG L+DA+RVFDE  +  + D LLWN+II  Y+FH CW E  
Sbjct: 151 GFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSL-LALDILLWNSIIAAYIFHGCWVEVL 209

Query: 175 SLFSDMISLGTIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
            LF  M+S+G +A TE  YAS+V AC ++  +KYG +VHGRI+K G L+AT + NSLV
Sbjct: 210 RLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAG-LEATNLWNSLV 266


>gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
          Length = 703

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/108 (36%), Positives = 60/108 (55%)
 Frame = -3

Query: 325 SLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETFSLFSDMISLG 146
           +L  MY+KCG +DDARRVFD +PV    DA+ W  ++  Y       E F LF  M+   
Sbjct: 207 ALADMYAKCGRVDDARRVFDRMPV---RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTR 263

Query: 145 TIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
            +   E  YA ++ AC+   ++ +G+ VHGR+ K G  D+    ++L+
Sbjct: 264 GVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALL 311


>ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
           gi|108707037|gb|ABF94832.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa
           Japonica Group] gi|125585525|gb|EAZ26189.1| hypothetical
           protein OsJ_10058 [Oryza sativa Japonica Group]
           gi|215706461|dbj|BAG93317.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 641

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/108 (36%), Positives = 60/108 (55%)
 Frame = -3

Query: 325 SLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETFSLFSDMISLG 146
           +L  MY+KCG +DDARRVFD +PV    DA+ W  ++  Y       E F LF  M+   
Sbjct: 207 ALADMYAKCGRVDDARRVFDRMPV---RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTR 263

Query: 145 TIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
            +   E  YA ++ AC+   ++ +G+ VHGR+ K G  D+    ++L+
Sbjct: 264 GVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALL 311


>ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/118 (35%), Positives = 66/118 (55%)
 Frame = -3

Query: 355 GIGLKVRIRVSLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETF 176
           G+G  + +  +++ MY KCG L +A  +FD++      DA+ WN II  +  +E   +T 
Sbjct: 370 GLGFNICVANTILDMYGKCGALVEACTIFDDME---RRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 175 SLFSDMISLGTIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
           SLF  M+   T+   +  Y S+V AC+  +   YG  +HGRIVK GM     +G++LV
Sbjct: 427 SLFVSMLR-STMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALV 483



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/106 (33%), Positives = 59/106 (55%)
 Frame = -3

Query: 325 SLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETFSLFSDMISLG 146
           +L+ MYSKC  LD A R+F E+P     + + W+ +I  YV ++ + E   LF DM+ +G
Sbjct: 178 ALVDMYSKCKKLDGAFRIFREMP---ERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVG 234

Query: 145 TIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNS 8
            + +++  YAS+  +C+     K G  +HG  +K      +IIG +
Sbjct: 235 -MGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTA 279



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355 GIGLKVRIRVSLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETF 176
           G+GL   +  +L+ MY KCG L +A ++ D +        + WN+II+ +   +      
Sbjct: 471 GMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE---EKTTVSWNSIISGFSSQKQSENAQ 527

Query: 175 SLFSDMISLGTIAITERF-YASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
             FS M+ +G   I + F YA+++  C+N    + GK +H +I+K  +     I ++LV
Sbjct: 528 RYFSQMLEMG--VIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLV 584


>ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
           gi|300148496|gb|EFJ15155.1| hypothetical protein
           SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/118 (31%), Positives = 64/118 (54%)
 Frame = -3

Query: 355 GIGLKVRIRVSLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETF 176
           G+   V +  SL+ MY KCG ++DARRVFD++ +    D + W ++I  YV H+   E  
Sbjct: 133 GLERNVMVGTSLIKMYGKCGCVEDARRVFDKLAL---QDVVSWTSMIMTYVQHDRCVEAL 189

Query: 175 SLFSDMISLGTIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
            LF  M   G +      YA+ + AC++      GK++H ++++DG     ++  ++V
Sbjct: 190 ELFHRMRPSGVLP-NRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIV 246



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/118 (29%), Positives = 59/118 (50%)
 Frame = -3

Query: 355 GIGLKVRIRVSLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETF 176
           G    V +  +++ MY KCG L+DAR VF+ +P     + + WN I+     H C  E  
Sbjct: 234 GFESDVVVSCAIVNMYGKCGSLEDAREVFERMP---HPNTVSWNAIVAACTQHGCCVEAL 290

Query: 175 SLFSDMISLGTIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
             F  M   G I   +  + +I+ ACS+     +G+++H  I++ G     I+GN ++
Sbjct: 291 WYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIM 348



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/108 (31%), Positives = 58/108 (53%)
 Frame = -3

Query: 325 SLMIMYSKCGFLDDARRVFDEIPVCFSNDALLWNTIINVYVFHECWAETFSLFSDMISLG 146
           +L+ MY+KCG L++A RVF +   C  N  + WNTI   YV  + W E   LF +M  L 
Sbjct: 545 ALINMYAKCGCLEEADRVFHQ---CGKN-LVSWNTIAAAYVQRDKWREALQLFQEM-QLE 599

Query: 145 TIAITERFYASIVGACSNARIDKYGKIVHGRIVKDGMLDATIIGNSLV 2
            +   +  + +++  CS+A     G+ +H  +++ GM    I+  +L+
Sbjct: 600 GLKADKVSFVTVLNGCSSA---SEGRKIHNILLETGMESDHIVSTALL 644