BLASTX nr result

ID: Coptis23_contig00034025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034025
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318680.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002338993.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002321622.1| high affinity nitrate transporter [Populus t...   129   3e-28
ref|XP_002321624.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
emb|CAG26717.1| nitrate transporter [Populus tremula x Populus t...   127   9e-28

>ref|XP_002318680.1| predicted protein [Populus trichocarpa] gi|222859353|gb|EEE96900.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/80 (78%), Positives = 69/80 (86%), Gaps = 2/80 (2%)
 Frame = +2

Query: 203 METSGP--KAESERPKFAIPVDSENKATEFRLFSAAPPHMRAFHLSWISFLACFVSTFAA 376
           ME  G   + ES+ PKF +PVDSE+KATEFRLFS A PHMRAFHLSW+SF ACFVSTFAA
Sbjct: 1   MEIKGKATEKESQSPKFTLPVDSEHKATEFRLFSVAAPHMRAFHLSWVSFFACFVSTFAA 60

Query: 377 PPLLPIIRDDLNLTATDIGN 436
           PPLLPIIRD+LNLTATDIGN
Sbjct: 61  PPLLPIIRDNLNLTATDIGN 80


>ref|XP_002338993.1| predicted protein [Populus trichocarpa] gi|222874180|gb|EEF11311.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/70 (85%), Positives = 66/70 (94%)
 Frame = +2

Query: 227 ESERPKFAIPVDSENKATEFRLFSAAPPHMRAFHLSWISFLACFVSTFAAPPLLPIIRDD 406
           ES+ PKFA+PVDSE+KATEFRLFS A PHMRAFHLSW+SF ACFVSTFAAPPLLPIIRD+
Sbjct: 11  ESQPPKFALPVDSEHKATEFRLFSVAAPHMRAFHLSWVSFFACFVSTFAAPPLLPIIRDN 70

Query: 407 LNLTATDIGN 436
           LNLTA+DIGN
Sbjct: 71  LNLTASDIGN 80


>ref|XP_002321622.1| high affinity nitrate transporter [Populus trichocarpa]
           gi|222868618|gb|EEF05749.1| high affinity nitrate
           transporter [Populus trichocarpa]
          Length = 491

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/70 (85%), Positives = 66/70 (94%)
 Frame = +2

Query: 227 ESERPKFAIPVDSENKATEFRLFSAAPPHMRAFHLSWISFLACFVSTFAAPPLLPIIRDD 406
           ES+ PKFA+PVDSE+KATEFRLFS A PHMRAFHLSW+SF ACFVSTFAAPPLLPIIRD+
Sbjct: 11  ESQPPKFALPVDSEHKATEFRLFSVAAPHMRAFHLSWVSFFACFVSTFAAPPLLPIIRDN 70

Query: 407 LNLTATDIGN 436
           LNLTA+DIGN
Sbjct: 71  LNLTASDIGN 80


>ref|XP_002321624.1| predicted protein [Populus trichocarpa] gi|222868620|gb|EEF05751.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/70 (84%), Positives = 66/70 (94%)
 Frame = +2

Query: 227 ESERPKFAIPVDSENKATEFRLFSAAPPHMRAFHLSWISFLACFVSTFAAPPLLPIIRDD 406
           ES+ PKFA+PVDSE+KATEFRLFS A PHM+AFHLSW+SF ACFVSTFAAPPLLPIIRD+
Sbjct: 11  ESQPPKFALPVDSEHKATEFRLFSVAAPHMQAFHLSWVSFFACFVSTFAAPPLLPIIRDN 70

Query: 407 LNLTATDIGN 436
           LNLTA+DIGN
Sbjct: 71  LNLTASDIGN 80


>emb|CAG26717.1| nitrate transporter [Populus tremula x Populus tremuloides]
          Length = 508

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/70 (84%), Positives = 66/70 (94%)
 Frame = +2

Query: 227 ESERPKFAIPVDSENKATEFRLFSAAPPHMRAFHLSWISFLACFVSTFAAPPLLPIIRDD 406
           ES+ PKFA+PVDSE+KATEFRLFS A PHMRAFHLSW+SF ACFVS+FAAPPLLPIIRD+
Sbjct: 11  ESQPPKFALPVDSEHKATEFRLFSVAAPHMRAFHLSWVSFFACFVSSFAAPPLLPIIRDN 70

Query: 407 LNLTATDIGN 436
           LNLTA+DIGN
Sbjct: 71  LNLTASDIGN 80


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