BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00034001
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242...    67   1e-09
ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002336351.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|NP_193700.2| Mitochondrial transcription termination factor ...    60   2e-07
ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arab...    60   2e-07

>ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
          Length = 564

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +3

Query: 3   SMYMWYREKILEKSRKALSTILATSDAKFVKHFVNVHPEGPAEW 134
           SMY+W R+K   KS  +LSTILA SDA+FVK+FV+VHPEGPA+W
Sbjct: 513 SMYVWLRDKGAAKSNLSLSTILACSDARFVKYFVDVHPEGPAQW 556


>ref|XP_002332130.1| predicted protein [Populus trichocarpa] gi|222875180|gb|EEF12311.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +3

Query: 6   MYMWYREKILEKSRKALSTILATSDAKFVKHFVNVHPEGPAEW 134
           MY W +EK   K + +LSTILA SDA+F+K+FV+VHPEGPA W
Sbjct: 525 MYTWLKEKGAAKPKLSLSTILACSDARFIKYFVDVHPEGPAMW 567


>ref|XP_002336351.1| predicted protein [Populus trichocarpa] gi|222834777|gb|EEE73240.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +3

Query: 6   MYMWYREKILEKSRKALSTILATSDAKFVKHFVNVHPEGPAEW 134
           MY W +EK   K + +LSTILA SDA+F+K+FV+VHPEGPA W
Sbjct: 87  MYTWLKEKGAAKPKLSLSTILACSDARFIKYFVDVHPEGPAMW 129


>ref|NP_193700.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332658810|gb|AEE84210.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 575

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +3

Query: 3   SMYMWYREKILEKSRKALSTILATSDAKFVKHFVNVHPEGPAEW 134
           SMY+W RE+   K   + STIL   DA+FVK+FVNVHPEGPA W
Sbjct: 524 SMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIW 567


>ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
           lyrata] gi|297315807|gb|EFH46230.1| hypothetical protein
           ARALYDRAFT_914700 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +3

Query: 3   SMYMWYREKILEKSRKALSTILATSDAKFVKHFVNVHPEGPAEW 134
           SMY+W RE+   K   + STIL   DA+FVK+FVNVHPEGPA W
Sbjct: 499 SMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIW 542