BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033483
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...   164   5e-39
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   161   5e-38
gb|AAM13399.1| MutS homolog 7 [Triticum aestivum]                     159   2e-37
ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   156   1e-36
ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-...   156   1e-36

>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
           gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
           MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/114 (66%), Positives = 101/114 (88%)
 Frame = -2

Query: 343 GTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGLIEHPEISLILAQYL 164
           G +GTL+ YLDNC+T+SGKRLLR W+CHPLK V  IN+RLNVV+ L+   +I L+++QYL
Sbjct: 559 GLSGTLFNYLDNCVTSSGKRLLRKWMCHPLKSVEGINNRLNVVEDLMTQSDIMLVISQYL 618

Query: 163 RRIPDIERLLGRVKASVGSSATLLLPLVGEKVLKQRVKLYGTLVKGMRVGIDLL 2
           R+IPDIER+LGRVKAS  +SA+L+LPL+G+KVL+QRVK++G+LVKG+R+GIDLL
Sbjct: 619 RKIPDIERMLGRVKASFQASASLVLPLIGKKVLRQRVKVFGSLVKGLRIGIDLL 672


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  161 bits (408), Expect = 5e-38
 Identities = 79/114 (69%), Positives = 98/114 (85%)
 Frame = -2

Query: 343 GTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGLIEHPEISLILAQYL 164
           G++GTLYKYLDNC+T+SGKRLLR+WICHPLKDV  IN+RLNVV+ L+ + E    +AQ L
Sbjct: 581 GSSGTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSFIAQCL 640

Query: 163 RRIPDIERLLGRVKASVGSSATLLLPLVGEKVLKQRVKLYGTLVKGMRVGIDLL 2
           R++PD+ERLLG+VKASV SSA LLLP  G+K+LKQRVK++G LVKG+RV IDLL
Sbjct: 641 RKLPDLERLLGQVKASVQSSALLLLPFFGKKLLKQRVKVFGLLVKGLRVAIDLL 694


>gb|AAM13399.1| MutS homolog 7 [Triticum aestivum]
          Length = 1160

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/114 (63%), Positives = 98/114 (85%)
 Frame = -2

Query: 343 GTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGLIEHPEISLILAQYL 164
           G++GTLYK+L++C+TASGKRLLR WICHPLKDV  IN RL+VV+G I+H  +  I   YL
Sbjct: 643 GSSGTLYKHLNHCITASGKRLLRRWICHPLKDVDAINRRLDVVEGFIQHCGVGSITLYYL 702

Query: 163 RRIPDIERLLGRVKASVGSSATLLLPLVGEKVLKQRVKLYGTLVKGMRVGIDLL 2
           R+IPD+ERLLGR++++VG ++ +LLP VGEK+LK+R+K++G L+KG+RVGIDLL
Sbjct: 703 RKIPDLERLLGRIRSTVGLTSAVLLPFVGEKILKRRIKMFGMLIKGLRVGIDLL 756


>ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
           MSH7-like [Cucumis sativus]
          Length = 1095

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/115 (65%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 GTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGLIEHPEISLIL-AQY 167
           G +GTLYKYLDNC+T+SGKRLLR WICHPLKDV EIN+RLNVV+ L+   +I ++L   Y
Sbjct: 572 GLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRLNVVEELMAQSDIMVLLGTTY 631

Query: 166 LRRIPDIERLLGRVKASVGSSATLLLPLVGEKVLKQRVKLYGTLVKGMRVGIDLL 2
           LR++PD+ERLLG++KA+V SSA+L+LPL+ +K+ K+RVKL+G+LVKG+R G+DLL
Sbjct: 632 LRKLPDLERLLGQIKATVQSSASLVLPLIRKKLQKRRVKLFGSLVKGLRTGLDLL 686


>ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cucumis sativus]
          Length = 1095

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/115 (65%), Positives = 100/115 (86%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 GTAGTLYKYLDNCLTASGKRLLRSWICHPLKDVGEINDRLNVVKGLIEHPEISLIL-AQY 167
           G +GTLYKYLDNC+T+SGKRLLR WICHPLKDV EIN+RLNVV+ L+   +I ++L   Y
Sbjct: 572 GLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRLNVVEELMAQSDIMVLLGTTY 631

Query: 166 LRRIPDIERLLGRVKASVGSSATLLLPLVGEKVLKQRVKLYGTLVKGMRVGIDLL 2
           LR++PD+ERLLG++KA+V SSA+L+LPL+ +K+ K+RVKL+G+LVKG+R G+DLL
Sbjct: 632 LRKLPDLERLLGQIKATVQSSASLVLPLIRKKLQKRRVKLFGSLVKGLRTGLDLL 686