BLASTX nr result

ID: Coptis23_contig00033479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033479
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    90   1e-19
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               90   1e-19
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    90   2e-19
emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]    85   5e-18
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...    80   2e-16

>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 90.1 bits (222), Expect(2) = 1e-19
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 65  KTSSGLNNA--HAKDQLSKLTGTTFICISMGFLNPSIGDNRESESLTNVAALSILVITIM 238
           K S  LN +    +DQLSKL+ T  +C  MG   PSIG     E  +NV AL ILVIT+M
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLM 133

Query: 239 VNICMQISTGVIYLYVNEHIIIMCIMIVLVWAQWYSA 349
           VN+C+Q+ TGVIY+Y  EH ++M IM+VL+    +SA
Sbjct: 134 VNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSA 170



 Score = 30.8 bits (68), Expect(2) = 1e-19
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +1

Query: 4   WIPCRLFSLNSVALTLLSI 60
           W PC+ FSLN+ +LT++++
Sbjct: 53  WFPCKFFSLNATSLTIIAV 71


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 90.1 bits (222), Expect(2) = 1e-19
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 65  KTSSGLNNA--HAKDQLSKLTGTTFICISMGFLNPSIGDNRESESLTNVAALSILVITIM 238
           K S  LN +    +DQLSKL+ T  +C  MG   PSIG     E  +NV AL ILVIT+M
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLM 133

Query: 239 VNICMQISTGVIYLYVNEHIIIMCIMIVLVWAQWYSA 349
           VN+C+Q+ TGVIY+Y  EH ++M IM+VL+    +SA
Sbjct: 134 VNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSA 170



 Score = 30.8 bits (68), Expect(2) = 1e-19
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +1

Query: 4   WIPCRLFSLNSVALTLLSI 60
           W PC+ FSLN+ +LT++++
Sbjct: 53  WFPCKFFSLNATSLTIIAV 71


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 89.7 bits (221), Expect(2) = 2e-19
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 65  KTSSGLNNA--HAKDQLSKLTGTTFICISMGFLNPSIGDNRESESLTNVAALSILVITIM 238
           K S  LN +    +DQLSKL+ T  +C  MG   PSIG     E  +NV AL ILVIT+M
Sbjct: 74  KLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLM 133

Query: 239 VNICMQISTGVIYLYVNEHIIIMCIMIVLVWAQWYSA 349
           VN+C+Q+ TGVIY+Y  EH ++M IM+VL+    +SA
Sbjct: 134 VNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSA 170



 Score = 30.8 bits (68), Expect(2) = 2e-19
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +1

Query: 4   WIPCRLFSLNSVALTLLSI 60
           W PC+ FSLN+ +LT++++
Sbjct: 53  WFPCKFFSLNATSLTIIAV 71


>emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]
          Length = 287

 Score = 85.1 bits (209), Expect(2) = 5e-18
 Identities = 41/84 (48%), Positives = 58/84 (69%)
 Frame = +2

Query: 98  KDQLSKLTGTTFICISMGFLNPSIGDNRESESLTNVAALSILVITIMVNICMQISTGVIY 277
           +DQLSKL+ T  +C  MG   PSIG     E  +NV AL IL+IT+MVN+C+++ TGVIY
Sbjct: 119 QDQLSKLSSTVLMCTVMGNFMPSIGTTENKEVFSNVIALDILMITLMVNVCIKMGTGVIY 178

Query: 278 LYVNEHIIIMCIMIVLVWAQWYSA 349
           ++  EH ++M IM+VL+    +SA
Sbjct: 179 VFWKEHAVLMFIMLVLLLILSFSA 202



 Score = 30.8 bits (68), Expect(2) = 5e-18
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +1

Query: 4   WIPCRLFSLNSVALTLLSIWQN 69
           W PC++FSLN  +LT++++  N
Sbjct: 85  WFPCKVFSLNVTSLTIIAVATN 106


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score = 80.5 bits (197), Expect(2) = 2e-16
 Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = +2

Query: 65  KTSSGLNNA--HAKDQLSKLTGTTFICISMGFLNPSIGDNRESESLTNVAALSILVITIM 238
           K S  LN +    +DQL+KL+ T F+C  MG   PS+G    ++ L N+ AL ILVIT +
Sbjct: 74  KLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVITDV 133

Query: 239 VNICMQISTGVIYLYVNEHIIIMCIMIVLVWAQWYSAT 352
           VNIC+Q+ TG IY++  EH +++ +M++++    +SAT
Sbjct: 134 VNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSAT 171



 Score = 30.0 bits (66), Expect(2) = 2e-16
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 4   WIPCRLFSLNSVALTLLSI 60
           W PC+ FSLN+ +LT +++
Sbjct: 53  WFPCKFFSLNATSLTFIAV 71


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