BLASTX nr result

ID: Coptis23_contig00033477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033477
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634404.1| PREDICTED: uncharacterized protein LOC100854...   120   3e-25
ref|XP_002307449.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
ref|XP_003602036.1| hypothetical protein MTR_3g088090 [Medicago ...   101   2e-19
ref|XP_002520339.1| conserved hypothetical protein [Ricinus comm...    93   7e-17
ref|NP_001154356.1| uncharacterized protein [Arabidopsis thalian...    86   9e-15

>ref|XP_003634404.1| PREDICTED: uncharacterized protein LOC100854126 [Vitis vinifera]
          Length = 234

 Score =  120 bits (302), Expect = 3e-25
 Identities = 66/158 (41%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
 Frame = -2

Query: 666 KTGICYCIGRTLCKILWACLASCCYVCEYGCMFLCHNMKKLKRQRRNHRREFDQENYLSD 487
           K GIC CIGR+LCK++WAC  SC    EY C FLC  + +LKR  R H ++F   +   D
Sbjct: 76  KLGICNCIGRSLCKMVWACFISCFSAWEYCCTFLCVKLPRLKRTNRGHIKDFQVSDSSCD 135

Query: 486 KE-ESTSYSH-SRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHRIRVDVSRNAV--SANG 319
            E +S  +S+ + R IE               HL+KSLRPRSH+IRV +SR++V  S   
Sbjct: 136 GEGDSEIFSYNAHRPIEVRRPPSRRWRDHRASHLRKSLRPRSHQIRVGISRDSVHSSRRN 195

Query: 318 MVDHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYQRTR 205
            + H  + +TVH I+V +TSKF +KG +    V++  R
Sbjct: 196 SIKHDNYINTVHGIRVTRTSKFVQKGLSFKGTVHRSRR 233


>ref|XP_002307449.1| predicted protein [Populus trichocarpa] gi|222856898|gb|EEE94445.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  110 bits (276), Expect = 3e-22
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 3/159 (1%)
 Frame = -2

Query: 669 HKTGICYCIGRTLCKILWACLASCCYVCEYGCMFLCHNMKKLKRQRRNHRREFDQENYLS 490
           +KTGIC C+G +LCK  WACL +   +  Y C+F+   +  LKR R  HR   D   + +
Sbjct: 75  YKTGICQCVGHSLCKTAWACLVAWFSMWGYCCIFMSDKLIMLKRVRHGHRS--DSSEFDT 132

Query: 489 DKEESTSYSHSRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHRIRVDVSRNAVSANGMV- 313
            +E+   + H  R++E             R+HL+KSLRPRSHRIRV +  +    +G + 
Sbjct: 133 SEED---FDHIPRTMEISGSSSRRTRDYRRVHLRKSLRPRSHRIRVGLGSDFDYGSGRIP 189

Query: 312 --DHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYQRTRR 202
              H KH ST+H+I+V  TS+F +K      + Y R RR
Sbjct: 190 NAKHGKHFSTIHSIRVTHTSQFVRKRAGFRGRAYPRQRR 228


>ref|XP_003602036.1| hypothetical protein MTR_3g088090 [Medicago truncatula]
           gi|355491084|gb|AES72287.1| hypothetical protein
           MTR_3g088090 [Medicago truncatula]
          Length = 248

 Score =  101 bits (252), Expect = 2e-19
 Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 16/172 (9%)
 Frame = -2

Query: 669 HKTGICYCIGRTLCKILWACLASCCYVCEYGCMFLC---HNMKKLKRQRRNHRREFDQEN 499
           +K GI  C+  + CK++WAC +SC ++  Y C FLC   HN+K  +R+RR  R E ++E 
Sbjct: 83  YKLGIIRCLCHSACKLIWACFSSCFHIWVYSCTFLCVKLHNVK--RRRRRKFRMEMNEEE 140

Query: 498 YLSDKEESTSYSHSRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHRIRVDVSRN------ 337
           Y+   +ES SY H   S E               HL+KSL+P+  R +V++SRN      
Sbjct: 141 YI---DESLSY-HLPVSAELSRSFSRRRRDYKGHHLRKSLKPKRGRAQVEISRNFSYKNK 196

Query: 336 -------AVSANGMVDHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYQRTRR 202
                     ++ ++ H  +   VH+IKV +TSKFA+K  N   +V +R RR
Sbjct: 197 SNHIIRDPCCSSNVIKHGNYKVMVHDIKVTQTSKFARKCMNNRKRVIRRQRR 248


>ref|XP_002520339.1| conserved hypothetical protein [Ricinus communis]
           gi|223540558|gb|EEF42125.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
 Frame = -2

Query: 669 HKTGICYCIGRTLCKILWACLASCCYVCEYGCMFLCHNMKKLKRQRRNHRREFDQENYLS 490
           +K  I  C+G +LCK+ WAC+     + +  C FL  ++  LKR   +HRR+  +     
Sbjct: 75  YKLRIFECVGHSLCKLAWACMVCWISLWKNCCFFLRDSLIMLKRVSHHHRRDSSE----F 130

Query: 489 DKEESTSYSHSRRSIE-XXXXXXXXXXXXXRIHLQKSLRPRSHRIRVDVSRNAVSANGMV 313
           D  E   Y +  R+++                HL++SLRP+SHRIRV +S  +    G  
Sbjct: 131 DTSEDDCYDYEHRTMDVSSRPLSRQMMDYRTAHLRRSLRPKSHRIRVGLSTGSEHGYGRY 190

Query: 312 DHYK---HHSTVHNIKVAKTSKFAKKGGNVNNKVYQRTR 205
            H K   H STV+NI+V ++SKF +KG N   K + R R
Sbjct: 191 HHIKHANHGSTVNNIRVIQSSKFVRKGINHRRKGHSRER 229


>ref|NP_001154356.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5263325|gb|AAD41427.1|AC007727_16 F8K7.16
           [Arabidopsis thaliana] gi|332192026|gb|AEE30147.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 233

 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
 Frame = -2

Query: 669 HKTGICYCIGRTLCKILWACLASCCYVCEYGCMFLCHNMKKLKRQRRNHRREFDQENYLS 490
           +K G  +CI     K+LW  ++   Y+  Y C F C+++   KR+RR     + +E+Y  
Sbjct: 75  YKVGFWHCIIHGFFKLLWVLVSCWFYMLGYCCSFFCYDLLHSKRRRRRRHNRYIEEDYDD 134

Query: 489 DKEE--------STSYSHSRRSIEXXXXXXXXXXXXXRIHLQKSLRPRSHRIRVDVSRNA 334
           + ++        S +Y  S+R                   L+KSLRPR+HR+RV V ++ 
Sbjct: 135 NSDDDDDVDDDGSFTYHRSKRECRKEE------------RLRKSLRPRNHRVRVGVRKDH 182

Query: 333 VSANGMVDHYKHHSTVHNIKVAKTSKFAKKGGNVNNKVYQRTR 205
            S +G+  H    S +H ++V++ SKFA+K     N+V+   R
Sbjct: 183 RSDSGLSQHADGGSPIHGVRVSRESKFARKVSKRRNRVHHGDR 225


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