BLASTX nr result

ID: Coptis23_contig00033475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033475
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313260.1| white-brown-complex ABC transporter family [...   225   3e-57
ref|XP_003529479.1| PREDICTED: ABC transporter G family member 2...   220   1e-55
emb|CBI24242.3| unnamed protein product [Vitis vinifera]              220   1e-55
ref|XP_002276041.1| PREDICTED: ABC transporter G family member 2...   220   1e-55
emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]   220   1e-55

>ref|XP_002313260.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222849668|gb|EEE87215.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 566

 Score =  225 bits (573), Expect = 3e-57
 Identities = 114/136 (83%), Positives = 125/136 (91%)
 Frame = -2

Query: 409 FSAKFRLRRMSLKEKEERVESLMHELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIH 230
           FSAKFRL+  S KE+EERVESLM ELGL HVANSFVGD+E RGISGGERKRVSIG+D+IH
Sbjct: 85  FSAKFRLKEKSSKEREERVESLMRELGLFHVANSFVGDEENRGISGGERKRVSIGVDMIH 144

Query: 229 DPPILLLDEPTSGLDSTSAFQVIELLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSH 50
           DPPILLLDEPTSGLDSTSA QVIELLSSMA+AKQRT+VL+IHQPSYRILQYI +FL+LS 
Sbjct: 145 DPPILLLDEPTSGLDSTSALQVIELLSSMAKAKQRTVVLSIHQPSYRILQYIPNFLILSR 204

Query: 49  GLNVHNGSLESLEDTI 2
           G  VHNGSLESLE+TI
Sbjct: 205 GSVVHNGSLESLEETI 220


>ref|XP_003529479.1| PREDICTED: ABC transporter G family member 23-like [Glycine max]
          Length = 655

 Score =  220 bits (560), Expect = 1e-55
 Identities = 109/136 (80%), Positives = 125/136 (91%)
 Frame = -2

Query: 409 FSAKFRLRRMSLKEKEERVESLMHELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIH 230
           +SAKFRL+ M+ K++E RVESL+ ELGL HVANSFVGD+E RGISGGERKRVSIG+D+IH
Sbjct: 168 YSAKFRLKEMTPKDRERRVESLLQELGLFHVANSFVGDEENRGISGGERKRVSIGVDMIH 227

Query: 229 DPPILLLDEPTSGLDSTSAFQVIELLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSH 50
           +PPILLLDEPTSGLDSTSA QVIELLSS+A+AKQRT+VL+IHQPSYRILQYIS FL+LSH
Sbjct: 228 NPPILLLDEPTSGLDSTSALQVIELLSSIAKAKQRTVVLSIHQPSYRILQYISKFLILSH 287

Query: 49  GLNVHNGSLESLEDTI 2
           G  VHNGSLE LE+TI
Sbjct: 288 GSVVHNGSLEQLEETI 303


>emb|CBI24242.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  220 bits (560), Expect = 1e-55
 Identities = 114/136 (83%), Positives = 123/136 (90%)
 Frame = -2

Query: 409 FSAKFRLRRMSLKEKEERVESLMHELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIH 230
           FSAKFRLR MS KEKEERV+SLM ELGLVHVA+SFVGD+E RGISGGERKRVSIG+D+IH
Sbjct: 165 FSAKFRLREMSGKEKEERVDSLMQELGLVHVADSFVGDEENRGISGGERKRVSIGVDMIH 224

Query: 229 DPPILLLDEPTSGLDSTSAFQVIELLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSH 50
           DPPILLLDEPTSGLDSTSA QVIELLSSMARAK RTIVL+IHQPSYR+LQYIS FL+LS 
Sbjct: 225 DPPILLLDEPTSGLDSTSALQVIELLSSMARAKHRTIVLSIHQPSYRLLQYISKFLILSR 284

Query: 49  GLNVHNGSLESLEDTI 2
           G  VH GSLE LE+ I
Sbjct: 285 GSVVHIGSLELLEEKI 300


>ref|XP_002276041.1| PREDICTED: ABC transporter G family member 23 [Vitis vinifera]
          Length = 650

 Score =  220 bits (560), Expect = 1e-55
 Identities = 114/136 (83%), Positives = 123/136 (90%)
 Frame = -2

Query: 409 FSAKFRLRRMSLKEKEERVESLMHELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIH 230
           FSAKFRLR MS KEKEERV+SLM ELGLVHVA+SFVGD+E RGISGGERKRVSIG+D+IH
Sbjct: 165 FSAKFRLREMSGKEKEERVDSLMQELGLVHVADSFVGDEENRGISGGERKRVSIGVDMIH 224

Query: 229 DPPILLLDEPTSGLDSTSAFQVIELLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSH 50
           DPPILLLDEPTSGLDSTSA QVIELLSSMARAK RTIVL+IHQPSYR+LQYIS FL+LS 
Sbjct: 225 DPPILLLDEPTSGLDSTSALQVIELLSSMARAKHRTIVLSIHQPSYRLLQYISKFLILSR 284

Query: 49  GLNVHNGSLESLEDTI 2
           G  VH GSLE LE+ I
Sbjct: 285 GSVVHIGSLELLEEKI 300


>emb|CAN68542.1| hypothetical protein VITISV_020445 [Vitis vinifera]
          Length = 650

 Score =  220 bits (560), Expect = 1e-55
 Identities = 114/136 (83%), Positives = 123/136 (90%)
 Frame = -2

Query: 409 FSAKFRLRRMSLKEKEERVESLMHELGLVHVANSFVGDDETRGISGGERKRVSIGIDVIH 230
           FSAKFRLR MS KEKEERV+SLM ELGLVHVA+SFVGD+E RGISGGERKRVSIG+D+IH
Sbjct: 165 FSAKFRLREMSGKEKEERVDSLMQELGLVHVADSFVGDEENRGISGGERKRVSIGVDMIH 224

Query: 229 DPPILLLDEPTSGLDSTSAFQVIELLSSMARAKQRTIVLTIHQPSYRILQYISSFLLLSH 50
           DPPILLLDEPTSGLDSTSA QVIELLSSMARAK RTIVL+IHQPSYR+LQYIS FL+LS 
Sbjct: 225 DPPILLLDEPTSGLDSTSALQVIELLSSMARAKHRTIVLSIHQPSYRLLQYISKFLILSR 284

Query: 49  GLNVHNGSLESLEDTI 2
           G  VH GSLE LE+ I
Sbjct: 285 GSVVHIGSLELLEEKI 300


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