BLASTX nr result

ID: Coptis23_contig00033465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033465
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553706.1| PREDICTED: peptide chain release factor 2-li...   100   2e-19
ref|XP_004168863.1| PREDICTED: peptide chain release factor 2-li...    99   4e-19
ref|XP_004135582.1| PREDICTED: peptide chain release factor 2-li...    99   4e-19
emb|CBI39588.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...    93   2e-17

>ref|XP_003553706.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 466

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/74 (66%), Positives = 57/74 (77%)
 Frame = -3

Query: 222 KISREHGLLMGKMKEVNGYERELLEHIDMLKLSREENDKELESESMNALLKMRXXXXXXX 43
           KISREHG L+GKMKEVN +E+ELLEHIDM+KL+REEND +LESES+ ALL MR       
Sbjct: 148 KISREHGSLLGKMKEVNAFEQELLEHIDMIKLAREENDADLESESLKALLNMRRNAKEKE 207

Query: 42  XXXXXAGEQDSCSC 1
                +GEQDSCSC
Sbjct: 208 LEALLSGEQDSCSC 221


>ref|XP_004168863.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
          Length = 472

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = -3

Query: 222 KISREHGLLMGKMKEVNGYERELLEHIDMLKLSREENDKELESESMNALLKMRXXXXXXX 43
           KISREHG +M K+KE+N +ERELLEHIDM+KL+REEND ELESES+NALL MR       
Sbjct: 153 KISREHGSIMSKIKEINAFERELLEHIDMIKLAREENDTELESESLNALLTMRRNSREKE 212

Query: 42  XXXXXAGEQDSCSC 1
                +GE DSCSC
Sbjct: 213 LEALLSGENDSCSC 226


>ref|XP_004135582.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
          Length = 467

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = -3

Query: 222 KISREHGLLMGKMKEVNGYERELLEHIDMLKLSREENDKELESESMNALLKMRXXXXXXX 43
           KISREHG +M K+KE+N +ERELLEHIDM+KL+REEND ELESES+NALL MR       
Sbjct: 148 KISREHGSIMSKIKEINAFERELLEHIDMIKLAREENDTELESESLNALLTMRRNSREKE 207

Query: 42  XXXXXAGEQDSCSC 1
                +GE DSCSC
Sbjct: 208 LEALLSGENDSCSC 221


>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/74 (64%), Positives = 54/74 (72%)
 Frame = -3

Query: 222 KISREHGLLMGKMKEVNGYERELLEHIDMLKLSREENDKELESESMNALLKMRXXXXXXX 43
           KISREHG+LMGKMK V   E+ELLEHIDM+KL+REEND ELESES+ ALL MR       
Sbjct: 151 KISREHGMLMGKMKGVKNLEQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKE 210

Query: 42  XXXXXAGEQDSCSC 1
                AG+ DSCSC
Sbjct: 211 LEALLAGDHDSCSC 224


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/74 (64%), Positives = 54/74 (72%)
 Frame = -3

Query: 222 KISREHGLLMGKMKEVNGYERELLEHIDMLKLSREENDKELESESMNALLKMRXXXXXXX 43
           KISREHG+LMGKMK V   E+ELLEHIDM+KL+REEND ELESES+ ALL MR       
Sbjct: 113 KISREHGMLMGKMKGVKNLEQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKE 172

Query: 42  XXXXXAGEQDSCSC 1
                AG+ DSCSC
Sbjct: 173 LEALLAGDHDSCSC 186


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