BLASTX nr result

ID: Coptis23_contig00033445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033445
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307630.1| proline transporter [Populus trichocarpa] gi...   124   1e-26
ref|XP_003536922.1| PREDICTED: lysine histidine transporter-like...   121   7e-26
ref|XP_002275636.1| PREDICTED: lysine histidine transporter-like...   120   9e-26
ref|XP_002520993.1| amino acid transporter, putative [Ricinus co...   113   2e-23
ref|XP_003520188.1| PREDICTED: LOW QUALITY PROTEIN: amino acid p...   108   6e-22

>ref|XP_002307630.1| proline transporter [Populus trichocarpa]
           gi|222857079|gb|EEE94626.1| proline transporter [Populus
           trichocarpa]
          Length = 382

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/77 (74%), Positives = 63/77 (81%)
 Frame = +3

Query: 3   AGCYQIYCRPTYAYFEERMLSDNYPKQFRLRNYLVRLVYTSVYMVTITTVAAAMPFFGDF 182
           +GCYQIYCRPTYAYFE  ML       F L+N L+RLV TS+Y+V IT +AAAMPFFGDF
Sbjct: 247 SGCYQIYCRPTYAYFENNMLRSKTASYFPLKNCLIRLVCTSIYIVLITLIAAAMPFFGDF 306

Query: 183 VSICGAIGFTPLDFVFP 233
           VSICGAIGFTPLDFVFP
Sbjct: 307 VSICGAIGFTPLDFVFP 323


>ref|XP_003536922.1| PREDICTED: lysine histidine transporter-like 5-like [Glycine max]
          Length = 423

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/78 (71%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   AGCYQIYCRPTYAYFEER-MLSDNYPKQFRLRNYLVRLVYTSVYMVTITTVAAAMPFFGD 179
           +GC+QIYCRPTYAYF+E    S+    QF LRN L RL++TS+YMV +T +AAAMPFFGD
Sbjct: 287 SGCFQIYCRPTYAYFQETGSQSNKSSSQFSLRNRLARLIFTSIYMVLVTLIAAAMPFFGD 346

Query: 180 FVSICGAIGFTPLDFVFP 233
           FVSICGAIGFTPLDFVFP
Sbjct: 347 FVSICGAIGFTPLDFVFP 364


>ref|XP_002275636.1| PREDICTED: lysine histidine transporter-like 5 [Vitis vinifera]
           gi|297735509|emb|CBI17949.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/77 (68%), Positives = 64/77 (83%)
 Frame = +3

Query: 3   AGCYQIYCRPTYAYFEERMLSDNYPKQFRLRNYLVRLVYTSVYMVTITTVAAAMPFFGDF 182
           +GC+QIYCRPT+ + EE++LS     +   RNYL+RL+ TSVYMV IT +AAAMPFFGDF
Sbjct: 316 SGCFQIYCRPTFIHLEEKLLSQKTASRIPFRNYLIRLLLTSVYMVVITLIAAAMPFFGDF 375

Query: 183 VSICGAIGFTPLDFVFP 233
           VSICGA+GFTPLDFVFP
Sbjct: 376 VSICGAVGFTPLDFVFP 392


>ref|XP_002520993.1| amino acid transporter, putative [Ricinus communis]
           gi|223539830|gb|EEF41410.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 424

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/78 (65%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   AGCYQIYCRPTYAYFEERMLS-DNYPKQFRLRNYLVRLVYTSVYMVTITTVAAAMPFFGD 179
           +GCYQIYCRPTYAYFE++M            +  L+R+V+TS+Y+V +T VAAAMPFFGD
Sbjct: 288 SGCYQIYCRPTYAYFEDKMKQWSKTANHIPAKERLIRVVFTSIYIVLVTLVAAAMPFFGD 347

Query: 180 FVSICGAIGFTPLDFVFP 233
           FVSICGA+GFTPLDFVFP
Sbjct: 348 FVSICGAVGFTPLDFVFP 365


>ref|XP_003520188.1| PREDICTED: LOW QUALITY PROTEIN: amino acid permease 2-like [Glycine
           max]
          Length = 426

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   AGCYQIYCRPTYAYFEERMLSDNYPKQ----FRLRNYLVRLVYTSVYMVTITTVAAAMPF 170
           +GC+QIYCRPTYA FEE   S +        F LRN   +L++TS++MV +T +AAAMPF
Sbjct: 287 SGCFQIYCRPTYACFEETRGSKSNKSTSHFPFPLRNRPAQLIFTSIFMVLVTLIAAAMPF 346

Query: 171 FGDFVSICGAIGFTPLDFVFP 233
           FGDFVSICGAIGFTPLDFVFP
Sbjct: 347 FGDFVSICGAIGFTPLDFVFP 367


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