BLASTX nr result

ID: Coptis23_contig00033426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033426
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273563.1| PREDICTED: uncharacterized RNA methyltransfe...   390   e-106
emb|CAN82187.1| hypothetical protein VITISV_031112 [Vitis vinifera]   381   e-103
ref|XP_002509532.1| conserved hypothetical protein [Ricinus comm...   369   e-100
ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransfe...   363   3e-98
ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransfe...   363   3e-98

>ref|XP_002273563.1| PREDICTED: uncharacterized RNA methyltransferase pc1998 [Vitis
           vinifera] gi|296082357|emb|CBI21362.3| unnamed protein
           product [Vitis vinifera]
          Length = 497

 Score =  390 bits (1003), Expect = e-106
 Identities = 194/245 (79%), Positives = 212/245 (86%), Gaps = 1/245 (0%)
 Frame = -1

Query: 891 LLGERDFWEHVGGIDISLAPSSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGL 712
           LLGE DFWEHVGGIDI+LAPSSFGQANTRAFDSLLRKLQ YVPYGA V DLYAGAGVIGL
Sbjct: 240 LLGEIDFWEHVGGIDIALAPSSFGQANTRAFDSLLRKLQKYVPYGAAVADLYAGAGVIGL 299

Query: 711 SLAVARKCRSVKCVEINKESKLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVV 532
           SLA  RKCRSVKC+EINKE++LSFEKTV RLPKS+D++ISWH ADTSI PLSWL GSDVV
Sbjct: 300 SLAATRKCRSVKCIEINKEARLSFEKTVGRLPKSIDTTISWHHADTSIGPLSWLMGSDVV 359

Query: 531 VVDPPRKGLDPSLIDALQTLPSSKLKAKAFESSFLKDKDEKRPWILREREAFVHVESKTA 352
           VVDPPRKGLDPSL+DAL+TL  ++ +A   E SF K K+EKRPWILR REA V +ESKT+
Sbjct: 360 VVDPPRKGLDPSLVDALRTLSLAEKRAMLTERSFSKVKNEKRPWILRAREASVQIESKTS 419

Query: 351 WERTGSLPKTLIYISCGWDSFKEDCRLLLS-STWRLEKAHGFNFFPGTQSIEVLAVFKRG 175
            E   SLPKTLIYISCGW+SFKEDC+ LLS   W L+KAHGFNFFPGTQSIEVLAVFKRG
Sbjct: 420 PEEGQSLPKTLIYISCGWESFKEDCKSLLSRKEWHLDKAHGFNFFPGTQSIEVLAVFKRG 479

Query: 174 PGVSL 160
           PG  L
Sbjct: 480 PGAGL 484


>emb|CAN82187.1| hypothetical protein VITISV_031112 [Vitis vinifera]
          Length = 480

 Score =  381 bits (979), Expect = e-103
 Identities = 193/250 (77%), Positives = 210/250 (84%), Gaps = 6/250 (2%)
 Frame = -1

Query: 891 LLGERDFWEHVGGIDISLAPSSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGL 712
           LLGE DFWEHVGGIDI+LAPSSFGQANTRAFDSLLRKLQ YVPYGA V DLYAGAGVIGL
Sbjct: 200 LLGEIDFWEHVGGIDIALAPSSFGQANTRAFDSLLRKLQKYVPYGAAVADLYAGAGVIGL 259

Query: 711 SLAVARKCR-----SVKCVEINKESKLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLA 547
           SLA  RKCR     SVKC+EINKE++LSFEKTV RLPKS+D +ISWH ADTSI PLSWL 
Sbjct: 260 SLAATRKCRQELRWSVKCIEINKEARLSFEKTVGRLPKSIDXTISWHHADTSIGPLSWLX 319

Query: 546 GSDVVVVDPPRKGLDPSLIDALQTLPSSKLKAKAFESSFLKDKDEKRPWILREREAFVHV 367
           GSDVVVVDPPRKGLDPSL+DAL+TL  ++ +A   E SF K K+EKRPWILR  EA V +
Sbjct: 320 GSDVVVVDPPRKGLDPSLVDALRTLSLAEKRAMLTERSFSKVKNEKRPWILRAXEASVQI 379

Query: 366 ESKTAWERTGSLPKTLIYISCGWDSFKEDCRLLLS-STWRLEKAHGFNFFPGTQSIEVLA 190
           ESKT+ E   SLPKTLIYISCGW+SFKEDC+ LLS   W L+KAHGFNFFPGTQSIEVLA
Sbjct: 380 ESKTSPEEGQSLPKTLIYISCGWESFKEDCKSLLSRKEWHLDKAHGFNFFPGTQSIEVLA 439

Query: 189 VFKRGPGVSL 160
           VFKRGPG  L
Sbjct: 440 VFKRGPGAGL 449


>ref|XP_002509532.1| conserved hypothetical protein [Ricinus communis]
            gi|223549431|gb|EEF50919.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 518

 Score =  369 bits (947), Expect = e-100
 Identities = 185/248 (74%), Positives = 209/248 (84%), Gaps = 4/248 (1%)
 Frame = -1

Query: 891  LLGERDFWEHVGGIDISLAPSSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGL 712
            LLG++DFWE VGGID+SLAPSSFGQANTRAFD+LLRKLQ YVP GA+V DLYAGAGVIGL
Sbjct: 257  LLGDQDFWERVGGIDMSLAPSSFGQANTRAFDALLRKLQKYVPLGASVADLYAGAGVIGL 316

Query: 711  SLAVARKCRSVKCVEINKESKLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVV 532
            SLA +RKCRSVKC+E+NK+SK+SFEK   RLPKSVDSSISW+QADTS+EPLSWL GS+VV
Sbjct: 317  SLAASRKCRSVKCIEVNKQSKISFEKAAERLPKSVDSSISWYQADTSVEPLSWLMGSEVV 376

Query: 531  VVDPPRKGLDPSLIDALQTLPSSKLKAKAFESSF---LKDKDEKRPWILREREAFVHVES 361
            +VDPPRKGLD SL+DAL T+ S + K K+  +SF    K KDEKRPWILR REA V + S
Sbjct: 377  IVDPPRKGLDASLVDALLTISSLERKPKSSPASFGHNSKVKDEKRPWILRAREASVEIGS 436

Query: 360  KTAWERTGSLPKTLIYISCGWDSFKEDCRLLLSS-TWRLEKAHGFNFFPGTQSIEVLAVF 184
            KT  E   SLP+TLIYISCGW+SFKEDC+ LLSS  W LEKAHGFNFFPGTQSIE+LAVF
Sbjct: 437  KTTLEDPQSLPQTLIYISCGWESFKEDCKSLLSSKEWHLEKAHGFNFFPGTQSIEILAVF 496

Query: 183  KRGPGVSL 160
            KRG    L
Sbjct: 497  KRGQQAGL 504


>ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like,
           partial [Cucumis sativus]
          Length = 414

 Score =  363 bits (932), Expect = 3e-98
 Identities = 184/244 (75%), Positives = 200/244 (81%), Gaps = 2/244 (0%)
 Frame = -1

Query: 891 LLGERDFWEHVGGIDISLAPSSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGL 712
           LLGERDFWEHVGGIDI L PSSFGQANT+AFDSLLRKLQ YVPYGA+V DLYAGAGVIGL
Sbjct: 156 LLGERDFWEHVGGIDICLTPSSFGQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGL 215

Query: 711 SLAVARKCRSVKCVEINKESKLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVV 532
           SLA  RKCRSVKCVE+NKESKLSFEKTV RLP  V+SSISWH ADTS EPLSW+ GSDVV
Sbjct: 216 SLAATRKCRSVKCVEVNKESKLSFEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVV 275

Query: 531 VVDPPRKGLDPSLIDALQTLPSSKLKAKAFESSF-LKDKDEKRPWILREREAFVHVESKT 355
           VVDPPRKGLD SL + L+ + S K K K       L  KDEKRPW+LR RE  V + S T
Sbjct: 276 VVDPPRKGLDASLANMLRDISSFKRKVKLLSKRLDLLLKDEKRPWVLRAREETVQIGSTT 335

Query: 354 AWERTGSLPKTLIYISCGWDSFKEDCRLLLSS-TWRLEKAHGFNFFPGTQSIEVLAVFKR 178
             E   SLP+TLIYISCGW+SFKEDC++LLS+  W LEKAHGFNFFPGTQSIEVLA+FKR
Sbjct: 336 DSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKR 395

Query: 177 GPGV 166
           G GV
Sbjct: 396 GQGV 399


>ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like
           [Cucumis sativus]
          Length = 519

 Score =  363 bits (932), Expect = 3e-98
 Identities = 184/244 (75%), Positives = 200/244 (81%), Gaps = 2/244 (0%)
 Frame = -1

Query: 891 LLGERDFWEHVGGIDISLAPSSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGL 712
           LLGERDFWEHVGGIDI L PSSFGQANT+AFDSLLRKLQ YVPYGA+V DLYAGAGVIGL
Sbjct: 261 LLGERDFWEHVGGIDICLTPSSFGQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGL 320

Query: 711 SLAVARKCRSVKCVEINKESKLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVV 532
           SLA  RKCRSVKCVE+NKESKLSFEKTV RLP  V+SSISWH ADTS EPLSW+ GSDVV
Sbjct: 321 SLAATRKCRSVKCVEVNKESKLSFEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVV 380

Query: 531 VVDPPRKGLDPSLIDALQTLPSSKLKAKAFESSF-LKDKDEKRPWILREREAFVHVESKT 355
           VVDPPRKGLD SL + L+ + S K K K       L  KDEKRPW+LR RE  V + S T
Sbjct: 381 VVDPPRKGLDASLANMLRDISSFKRKVKLLSKRLDLLLKDEKRPWVLRAREETVQIGSTT 440

Query: 354 AWERTGSLPKTLIYISCGWDSFKEDCRLLLSS-TWRLEKAHGFNFFPGTQSIEVLAVFKR 178
             E   SLP+TLIYISCGW+SFKEDC++LLS+  W LEKAHGFNFFPGTQSIEVLA+FKR
Sbjct: 441 DSEPNQSLPQTLIYISCGWESFKEDCKMLLSNKAWHLEKAHGFNFFPGTQSIEVLAIFKR 500

Query: 177 GPGV 166
           G GV
Sbjct: 501 GQGV 504


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