BLASTX nr result

ID: Coptis23_contig00033406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033406
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36206.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vi...   148   5e-34
ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populu...   148   5e-34
ref|XP_002517546.1| Gibberellin 20 oxidase, putative [Ricinus co...   142   3e-32
ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...   141   5e-32

>emb|CBI36206.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/134 (51%), Positives = 90/134 (67%)
 Frame = +1

Query: 1   IDFSNEDLKPGSSSWISTRVQVRKALEELGCFEVIYDKVPMEAHQEMFGAMKDLFKLPVE 180
           IDFS E+LKPGS SW S    VR ALEE GCF   Y++VP+E H ++F A+ +LF LP E
Sbjct: 160 IDFSEENLKPGSDSWFSVCHDVRHALEEYGCFMAYYNQVPLELHNKIFNALGELFDLPTE 219

Query: 181 TKIKSVNEVLNYGYIGQDKSIPHHEGIGIGDAAAIENVQSFTNLMWPEGNPSFCQTVHSY 360
            K+K+ ++  ++GYIGQ  + P HE +GI  A  +E +QSF  LMWP GN  FC+ VHSY
Sbjct: 220 IKVKNTSDKPSHGYIGQIPAYPLHESMGIDHATNLEEIQSFAKLMWPAGNEHFCEVVHSY 279

Query: 361 VHRVLNLEQMVKRM 402
              +  LEQ+V RM
Sbjct: 280 TSLLAELEQVVMRM 293


>ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vitis vinifera]
          Length = 313

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/134 (51%), Positives = 90/134 (67%)
 Frame = +1

Query: 1   IDFSNEDLKPGSSSWISTRVQVRKALEELGCFEVIYDKVPMEAHQEMFGAMKDLFKLPVE 180
           IDFS E+LKPGS SW S    VR ALEE GCF   Y++VP+E H ++F A+ +LF LP E
Sbjct: 12  IDFSEENLKPGSDSWFSVCHDVRHALEEYGCFMAYYNQVPLELHNKIFNALGELFDLPTE 71

Query: 181 TKIKSVNEVLNYGYIGQDKSIPHHEGIGIGDAAAIENVQSFTNLMWPEGNPSFCQTVHSY 360
            K+K+ ++  ++GYIGQ  + P HE +GI  A  +E +QSF  LMWP GN  FC+ VHSY
Sbjct: 72  IKVKNTSDKPSHGYIGQIPAYPLHESMGIDHATNLEEIQSFAKLMWPAGNEHFCEVVHSY 131

Query: 361 VHRVLNLEQMVKRM 402
              +  LEQ+V RM
Sbjct: 132 TSLLAELEQVVMRM 145


>ref|XP_002298131.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845389|gb|EEE82936.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  148 bits (373), Expect = 5e-34
 Identities = 71/135 (52%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   IDFSNEDLKPGSSSWISTRVQVRKALEELGCFEVIYDKVPMEAHQEMFGAMKDLFKLPVE 180
           IDFS E++KPG+SSW+ST   V  ALEE GCF  +YDKVP+  H ++F  +KDLF LP+E
Sbjct: 12  IDFSKENMKPGTSSWLSTCKDVMYALEEYGCFVAVYDKVPLTLHNDLFSTLKDLFDLPIE 71

Query: 181 TKIKSVNEVLNYGYIGQDKSIPH-HEGIGIGDAAAIENVQSFTNLMWPEGNPSFCQTVHS 357
           TK K+V+++  YGY+G    IP  +EG+GI +A  +E  + F + MWP GN  FC+TV S
Sbjct: 72  TKRKNVSDLPYYGYVGNQPFIPSLYEGMGIDNAITLEGTEDFADTMWPGGNDHFCKTVLS 131

Query: 358 YVHRVLNLEQMVKRM 402
           Y   V  LEQMV RM
Sbjct: 132 YSMLVSELEQMVVRM 146


>ref|XP_002517546.1| Gibberellin 20 oxidase, putative [Ricinus communis]
           gi|223543178|gb|EEF44710.1| Gibberellin 20 oxidase,
           putative [Ricinus communis]
          Length = 321

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/135 (49%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1   IDFSNEDLKPGSSSWISTRVQVRKALEELGCFEVIYDKVPMEAHQEMFGAMKDLFKLPVE 180
           IDFS E+LKPG+SSW+ST   V +ALEE GCF  +Y+K+P+E     +  +  LF LP++
Sbjct: 12  IDFSQENLKPGTSSWVSTCKNVLRALEEYGCFIAVYEKIPLELQSSFYNKLITLFDLPID 71

Query: 181 TKIKSVNEVLNYGYIGQDKSIPH-HEGIGIGDAAAIENVQSFTNLMWPEGNPSFCQTVHS 357
           TK K+V+ +  YGY+G    +P  +EG+GI +AA +E    FTN+MWP G+  FC+TV S
Sbjct: 72  TKRKNVSAIPYYGYVGNQPFVPPLYEGMGINNAATMEGTLDFTNIMWPNGDDDFCKTVFS 131

Query: 358 YVHRVLNLEQMVKRM 402
           Y   V  LEQMV RM
Sbjct: 132 YSKWVAELEQMVTRM 146


>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
           gi|297743335|emb|CBI36202.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  141 bits (356), Expect = 5e-32
 Identities = 59/134 (44%), Positives = 97/134 (72%)
 Frame = +1

Query: 1   IDFSNEDLKPGSSSWISTRVQVRKALEELGCFEVIYDKVPMEAHQEMFGAMKDLFKLPVE 180
           IDFS+ +LKPG+  W   + QV+KALEE GCFE  ++KVP++  + +FGA+++LF LP++
Sbjct: 12  IDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFGALEELFDLPLQ 71

Query: 181 TKIKSVNEVLNYGYIGQDKSIPHHEGIGIGDAAAIENVQSFTNLMWPEGNPSFCQTVHSY 360
           TK+++ ++   +GY+GQ  ++P +E +GI DA   E  + FT L+WPEGNP+FC+T+ S+
Sbjct: 72  TKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEGNPNFCKTIQSF 131

Query: 361 VHRVLNLEQMVKRM 402
             ++  L+  ++RM
Sbjct: 132 SEQLSELDHTIRRM 145


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