BLASTX nr result

ID: Coptis23_contig00033402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033402
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600705.1| Condensin complex subunit [Medicago truncatu...   156   1e-36
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   155   2e-36
ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like ...   155   3e-36
gb|EEE65468.1| hypothetical protein OsJ_20859 [Oryza sativa Japo...   155   4e-36
gb|EEC80341.1| hypothetical protein OsI_22413 [Oryza sativa Indi...   154   7e-36

>ref|XP_003600705.1| Condensin complex subunit [Medicago truncatula]
           gi|355489753|gb|AES70956.1| Condensin complex subunit
           [Medicago truncatula]
          Length = 1076

 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/131 (61%), Positives = 101/131 (77%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   PLLLLQFLDVETYESVGEAVMESLLKDGMVNVREDQSIRHFIESTRDTNEGE--HTQSTV 175
           PL LL++LDVETYESV E+VME+LLK G+V ++   SI+  I S  DT EGE  H   ++
Sbjct: 308 PLELLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQHITSNSDTAEGEGVHCPPSI 367

Query: 176 L--EAEVAFYWRIVCKHLQTEAQAKGSNAAVTSGTEAAVYAEEASDKNDLLEKVLPATVS 349
           +  EAE A YWR VCKHLQ+EA A GS+AA T+GTEA VYA EASDKNDLLEK+LPA+V 
Sbjct: 368 ILMEAEAALYWRTVCKHLQSEAHALGSDAAATAGTEAEVYAAEASDKNDLLEKILPASVD 427

Query: 350 DYVELIKTHLV 382
           +Y+EL++ H+V
Sbjct: 428 EYIELVRAHIV 438


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  155 bits (393), Expect = 2e-36
 Identities = 80/130 (61%), Positives = 102/130 (78%), Gaps = 4/130 (3%)
 Frame = +2

Query: 2   PLLLLQFLDVETYESVGEAVMESLLKDGMVNVREDQSIRHFIESTRDTNEGEH----TQS 169
           P+ LL++LDVETYE VGE+VME+LLK G V +++DQSIR FI +T +  EGE      + 
Sbjct: 275 PIELLKYLDVETYELVGESVMEALLKAGAVQLQDDQSIRQFIVATSNEIEGESGHCIPRI 334

Query: 170 TVLEAEVAFYWRIVCKHLQTEAQAKGSNAAVTSGTEAAVYAEEASDKNDLLEKVLPATVS 349
            ++EAEVA YW+ VC++LQ +AQ +GS+AA T GTEAAVYA EASD NDLL++VLPA VS
Sbjct: 335 XLMEAEVALYWKTVCRNLQMKAQERGSDAAATMGTEAAVYAAEASDNNDLLDRVLPAMVS 394

Query: 350 DYVELIKTHL 379
           DYVEL+K HL
Sbjct: 395 DYVELVKAHL 404


>ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1096

 Score =  155 bits (392), Expect = 3e-36
 Identities = 78/129 (60%), Positives = 99/129 (76%), Gaps = 4/129 (3%)
 Frame = +2

Query: 2   PLLLLQFLDVETYESVGEAVMESLLKDGMVNVREDQSIRHFIESTRDTNEGE--HTQSTV 175
           P+ LL++LDVETYESV E+VME+LLK G+V ++   SI+ +I S  D  EG+  H   ++
Sbjct: 342 PIELLKYLDVETYESVSESVMEALLKAGLVELQNGASIQQYISSNGDRTEGDSVHCPPSI 401

Query: 176 --LEAEVAFYWRIVCKHLQTEAQAKGSNAAVTSGTEAAVYAEEASDKNDLLEKVLPATVS 349
             +EAE A YWR VCKHLQ+EA AKGS+AA T GTEA VYA EASDKNDLLEK+LPATV 
Sbjct: 402 QPMEAEAALYWRTVCKHLQSEAHAKGSDAAATMGTEAEVYAAEASDKNDLLEKILPATVG 461

Query: 350 DYVELIKTH 376
           +Y+EL++ H
Sbjct: 462 EYIELVRAH 470


>gb|EEE65468.1| hypothetical protein OsJ_20859 [Oryza sativa Japonica Group]
          Length = 947

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/125 (59%), Positives = 96/125 (76%)
 Frame = +2

Query: 5   LLLLQFLDVETYESVGEAVMESLLKDGMVNVREDQSIRHFIESTRDTNEGEHTQSTVLEA 184
           + LL+FLDVETYE VGE VM  L+KDG V V++ Q+IR +  +  +    + +   +++A
Sbjct: 186 ITLLRFLDVETYEEVGETVMGVLMKDGSVRVQDGQTIRQYFTANTEDEAEKVSNIQLMDA 245

Query: 185 EVAFYWRIVCKHLQTEAQAKGSNAAVTSGTEAAVYAEEASDKNDLLEKVLPATVSDYVEL 364
           EVA YW+I+CKHLQ EAQ KGS AA T+GTEAAVYA EASDKNDLL+ VLP+T+SDYV+L
Sbjct: 246 EVALYWKIMCKHLQAEAQIKGSEAATTTGTEAAVYASEASDKNDLLDSVLPSTISDYVDL 305

Query: 365 IKTHL 379
           +K HL
Sbjct: 306 VKAHL 310


>gb|EEC80341.1| hypothetical protein OsI_22413 [Oryza sativa Indica Group]
          Length = 1085

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/125 (59%), Positives = 96/125 (76%)
 Frame = +2

Query: 5   LLLLQFLDVETYESVGEAVMESLLKDGMVNVREDQSIRHFIESTRDTNEGEHTQSTVLEA 184
           + LL+FLDVETYE VGE VM  L+KDG V V++ Q+IR +  +  +    + +   +++A
Sbjct: 324 ITLLRFLDVETYEEVGETVMGVLMKDGSVRVQDGQTIRQYFTANTEDEAEKVSNIQLMDA 383

Query: 185 EVAFYWRIVCKHLQTEAQAKGSNAAVTSGTEAAVYAEEASDKNDLLEKVLPATVSDYVEL 364
           EVA YW+I+CKHLQ EAQ KGS AA T+GTEAAVYA EASDKNDLL+ VLP+T+SDYV+L
Sbjct: 384 EVALYWKIMCKHLQAEAQIKGSEAATTTGTEAAVYASEASDKNDLLDGVLPSTISDYVDL 443

Query: 365 IKTHL 379
           +K HL
Sbjct: 444 VKAHL 448


Top