BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00033399
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35582.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   205   4e-51
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi...   200   1e-49
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   200   1e-49

>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  213 bits (542), Expect = 1e-53
 Identities = 100/141 (70%), Positives = 120/141 (85%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           LSACANL AIKQGKEIHG L+RKL H HLFVANSLLD Y KCG++  AR +FD+++NKDV
Sbjct: 351 LSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDV 410

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKGVKYFEE 362
           ASWNTMILGYGM GE+D AI+LFE MR  DV+ D VS+IA+LS CSHGGL+EKG KYF+E
Sbjct: 411 ASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDE 470

Query: 363 MLSQDLKPTSVHYACMVDLLG 425
           + ++ ++PT +HYACMVDLLG
Sbjct: 471 LKARGIEPTQMHYACMVDLLG 491



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/139 (32%), Positives = 68/139 (48%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L     L   K G+E+HG  +R  L S +F+ANSL+D+Y K G    A  VF ++  K+V
Sbjct: 150 LPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNV 209

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKGVKYFEE 362
            SWN MI  +       VA+ L   M++     + V++  +L  C+  GLV  G      
Sbjct: 210 VSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPG------ 263

Query: 363 MLSQDLKPTSVHYACMVDL 419
              +++   S+H  C  DL
Sbjct: 264 ---KEIHARSIHMGCAFDL 279



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/114 (35%), Positives = 67/114 (58%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L ACA +  ++ GKEIH   +       LFV+N+L D+Y K G L  AR VFD  S +D 
Sbjct: 251 LPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TSLRDE 309

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            S+N +I+G+    +   +++LF  M+ + +K D VS++  LS C++   +++G
Sbjct: 310 VSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQG 363



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L ACA+   +++G+E+HG +V+    S +FV N+LL  Y  CG L  A +VFD++  KD+
Sbjct: 48  LKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDL 107

Query: 183 ASWNTMILGYGMQG-EVDVAINLFEAMRNVDVKCDLVSYIAILSV 314
            SWNTMI  + + G     A+++F  M +  +K + ++  + L V
Sbjct: 108 VSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPV 152


>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  205 bits (521), Expect = 4e-51
 Identities = 98/141 (69%), Positives = 117/141 (82%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           +SACANL  I+QGKEIHGLLVRKL H+HLFVANSLLDLY +CG++  A +VF  I NKDV
Sbjct: 550 VSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDV 609

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKGVKYFEE 362
           ASWNTMILGYGM+GE+D AINLFEAM+   V+ D VS++A+LS CSHGGL+EKG KYF+ 
Sbjct: 610 ASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKM 669

Query: 363 MLSQDLKPTSVHYACMVDLLG 425
           M   +++PT  HYACMVDLLG
Sbjct: 670 MCDLNIEPTHTHYACMVDLLG 690



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/114 (37%), Positives = 70/114 (61%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L ACA L  +  GKEIH  ++R      LFV+N+L D+Y KCG L  A+ VF+ IS +D 
Sbjct: 450 LPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDE 508

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            S+N +I+GY    +   ++ LF  MR + ++ D+VS++ ++S C++   + +G
Sbjct: 509 VSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQG 562



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L  C++   +++G+E+HG+  +      +FV N+LL  Y  CG    A +VFD++  +D 
Sbjct: 144 LKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDK 203

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAM--RNVDVKCDLVSYIAILSVCS 320
            SWNT+I    + G  + A+  F  M      ++ DLV+ +++L VC+
Sbjct: 204 VSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCA 251



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/114 (27%), Positives = 56/114 (49%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L     L   K G E+HG  ++  + S +F++NSL+D+Y K G    A  +F+++  +++
Sbjct: 349 LPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNI 408

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            SWN MI  +        A+ L   M+      + V++  +L  C+  G +  G
Sbjct: 409 VSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVG 462



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRK-LLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKD 179
           L  CA        + +H   ++  LL  H+ V N+L+D+Y KCG    +++VFD+I  ++
Sbjct: 247 LPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERN 306

Query: 180 VASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKGVK 350
           V SWN +I  +  +G+   A+++F  M +  ++ + V+  ++L V    GL + G++
Sbjct: 307 VISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGME 363


>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  204 bits (520), Expect = 5e-51
 Identities = 96/141 (68%), Positives = 118/141 (83%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           +SACANL A+KQGKE+HGL VRK LH+HLF+AN+LLD Y+KCG++  A +VF QI ++D 
Sbjct: 418 ISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDT 477

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKGVKYFEE 362
           ASWN+MILGYGM GE+ +AINLFEAM+   V+ D VSYIA+LS CSHGGLVE+G KYFE 
Sbjct: 478 ASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEH 537

Query: 363 MLSQDLKPTSVHYACMVDLLG 425
           M  Q++KPT +HYACMVDLLG
Sbjct: 538 MQVQNIKPTQMHYACMVDLLG 558



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/114 (38%), Positives = 69/114 (60%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L ACA +  ++ GKEIH   +R      LFV+N+L D+Y KCG L  AR+VF +IS +D 
Sbjct: 318 LPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDE 376

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            S+N +I+GY        ++ LF  M    +K D+VSY+ ++S C++   +++G
Sbjct: 377 VSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG 430



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L ACA+  ++++G+EIHG++ +    S +FV N+LL  Y  CG L   ++VFD++  +DV
Sbjct: 14  LKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDV 73

Query: 183 ASWNTMILGYGMQGEVDVAINLF-EAMRNVDVKCDLVSYIAILSVCS 320
            SWN++I  + + G    AI+LF E       + ++VS +++L VC+
Sbjct: 74  VSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/114 (33%), Positives = 59/114 (51%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L     L     GKEIHG  +R  L S +FVAN+L+D+Y K G+ + A  VF+QI  K++
Sbjct: 217 LPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNI 276

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            SWN M+  +        A++L   M+      + V++  +L  C+  G +  G
Sbjct: 277 VSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPG 330



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/104 (34%), Positives = 59/104 (56%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L  CA L     G++IH  +V+  L S + V N+L+D+Y KCG +  +R+VFD+IS ++ 
Sbjct: 116 LPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNG 175

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSV 314
            SWN +I           A+ +F  M +  VK + V++ ++L V
Sbjct: 176 VSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPV 219


>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/141 (67%), Positives = 119/141 (84%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           +SACANL A+KQGKE+HG+ +R  L+SHLFV+NSLLD Y KCG++  A ++F+QI  KDV
Sbjct: 421 ISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDV 480

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKGVKYFEE 362
           ASWNTMILGYGM GE++ AI++FEAMR+  V+ DLVSYIA+LS CSHGGLVE+G +YF E
Sbjct: 481 ASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSE 540

Query: 363 MLSQDLKPTSVHYACMVDLLG 425
           ML+Q L+PT +HY CMVDLLG
Sbjct: 541 MLAQRLEPTEMHYTCMVDLLG 561



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/114 (43%), Positives = 73/114 (64%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L ACA L  +  GKEIH + VR  L S LFV+NSL+D+Y KCG L  AR VF+  S KD 
Sbjct: 321 LPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDE 379

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            S+N +I+GY    +   ++NLF  MR +  K D+VS++ ++S C++   +++G
Sbjct: 380 VSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 433



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/114 (30%), Positives = 54/114 (47%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L     L   K GKEIHG  +R    + +F+ANSL+D+Y K G    A  +F  +  +++
Sbjct: 220 LPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNI 279

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            SWN MI  Y +      AI     M+      + V++  +L  C+  G +  G
Sbjct: 280 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPG 333



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L  C++   I +G E+HG++ +    + ++V N+LL LY  CG L  AR++FD++  +DV
Sbjct: 17  LKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDV 76

Query: 183 ASWNTMILGYGMQGEVDVAINLF--EAMRNVDVKCDLVSYIAILSV 314
            SWNT+I    + G+   A N +    +R+V +K +LVS I++L +
Sbjct: 77  VSWNTIIGLLSVNGDYTEARNYYFWMILRSV-IKPNLVSVISLLPI 121


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/141 (67%), Positives = 119/141 (84%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           +SACANL A+KQGKE+HG+ +R  L+SHLFV+NSLLD Y KCG++  A ++F+QI  KDV
Sbjct: 570 ISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDV 629

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKGVKYFEE 362
           ASWNTMILGYGM GE++ AI++FEAMR+  V+ DLVSYIA+LS CSHGGLVE+G +YF E
Sbjct: 630 ASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSE 689

Query: 363 MLSQDLKPTSVHYACMVDLLG 425
           ML+Q L+PT +HY CMVDLLG
Sbjct: 690 MLAQRLEPTEMHYTCMVDLLG 710



 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/114 (43%), Positives = 73/114 (64%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L ACA L  +  GKEIH + VR  L S LFV+NSL+D+Y KCG L  AR VF+  S KD 
Sbjct: 470 LPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDE 528

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            S+N +I+GY    +   ++NLF  MR +  K D+VS++ ++S C++   +++G
Sbjct: 529 VSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQG 582



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/114 (30%), Positives = 54/114 (47%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L     L   K GKEIHG  +R    + +F+ANSL+D+Y K G    A  +F  +  +++
Sbjct: 369 LPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNI 428

Query: 183 ASWNTMILGYGMQGEVDVAINLFEAMRNVDVKCDLVSYIAILSVCSHGGLVEKG 344
            SWN MI  Y +      AI     M+      + V++  +L  C+  G +  G
Sbjct: 429 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPG 482



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   LSACANLNAIKQGKEIHGLLVRKLLHSHLFVANSLLDLYMKCGKLVFARQVFDQISNKDV 182
           L  C++   I +G E+HG++ +    + ++V N+LL LY  CG L  AR++FD++  +DV
Sbjct: 166 LKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDV 225

Query: 183 ASWNTMILGYGMQGEVDVAINLF--EAMRNVDVKCDLVSYIAILSV 314
            SWNT+I    + G+   A N +    +R+V +K +LVS I++L +
Sbjct: 226 VSWNTIIGLLSVNGDYTEARNYYFWMILRSV-IKPNLVSVISLLPI 270